Factsheet for Bra003804.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
golgi 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003804.1-P	golgi
Bra008146.1-P	golgi
Bra015915.1-P	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74380.1	Bra003804.1-P	AT1G74380.1	22665445
AT1G74380.1	Bra008146.1-P	AT1G74380.1	22665445
AT1G74380.1	Bra015915.1-P	AT1G74380.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68187	Canola	cytosol	48.36	99.1
Bra015915.1-P	Field mustard	plastid	95.62	95.83
Bra008146.1-P	Field mustard	cytosol	46.61	95.52
AT1G74380.1	Thale cress	plastid	94.09	94.09
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	78.34	79.56
Bra009305.1-P	Field mustard	cytosol	78.99	79.34
KRH56886	Soybean	endoplasmic reticulum	76.81	78.52
KRH03516	Soybean	mitochondrion	76.15	77.85
HORVU6Hr1G040960.1	Barley	cytosol	40.48	77.08
PGSC0003DMT400063414	Potato	plastid	75.05	76.22
PGSC0003DMT400041333	Potato	plastid	75.49	75.99
Solyc03g115740.1.1	Tomato	plastid	73.96	75.11
PGSC0003DMT400073000	Potato	cytosol	39.39	74.69
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	80.96	73.56
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	66.3	67.79
GSMUA_Achr10P...	Banana	cytosol	63.9	67.28
Zm00001d016687_P001	Maize	plasma membrane	68.71	65.69
TraesCS5A01G129800.1	Wheat	mitochondrion	63.68	65.39
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	63.68	65.39
EES06903	Sorghum	plastid	68.49	65.21
Os02t0529600-01	Rice	golgi, peroxisome, plastid	68.49	65.21
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	63.24	64.94
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	62.8	64.79
GSMUA_Achr3P22760_001	Banana	cytosol	64.77	64.49
TraesCS6D01G181200.1	Wheat	plastid	66.96	64.02
TraesCS6A01G196600.1	Wheat	plastid	66.74	63.81
TraesCS6B01G221000.1	Wheat	plastid	66.74	63.81
Os12t0149300-01	Rice	golgi	63.02	61.8
GSMUA_Achr10P...	Banana	plastid	67.18	60.91
EES16639	Sorghum	golgi	59.74	58.71
Zm00001d023399_P001	Maize	golgi, mitochondrion	57.99	58.11
Zm00001d023417_P001	Maize	golgi, mitochondrion	57.77	57.89
GSMUA_Achr11P...	Banana	cytosol	64.11	57.68
Bra036262.1-P	Field mustard	mitochondrion	54.92	54.33
Bra018545.1-P	Field mustard	mitochondrion	54.7	54.11
Bra000877.1-P	Field mustard	mitochondrion	54.49	53.78
Bra007696.1-P	Field mustard	mitochondrion	52.52	52.63
Bra014396.1-P	Field mustard	mitochondrion	52.08	51.85
EES15672	Sorghum	mitochondrion	48.8	43.3
Zm00001d023398_P001	Maize	mitochondrion	47.92	42.69
Zm00001d043041_P001	Maize	nucleus	25.82	40.0
Bra017847.1-P	Field mustard	golgi	34.35	35.84
Bra039938.1-P	Field mustard	golgi, plastid	33.7	34.38
Zm00001d023418_P001	Maize	nucleus	48.14	21.34

Protein Annotations

EnsemblPlants:Bra003804.1	EnsemblPlants:Bra003804.1-P	EnsemblPlantsGene:Bra003804	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF4	PFAM:PF05637	SEG:seg
TMHMM:TMhelix	UniParc:UPI00025416B1	UniProt:M4CHX1	MapMan:21.2.1.1.2	:	:

Description

AT1G74380 (E=3e-245) XXT5 | XXT5 (XYLOGLUCAN XYLOSYLTRANSFERASE 5); transferase/ transferase, transferring glycosyl groups / xyloglucan 6-xylosyltransferase

Coordinates

chrA07:-:15155480..15156853

Molecular Weight (calculated)

51679.1 Da

IEP (calculated)

7.541

GRAVY (calculated)

-0.395

Length

457 amino acids

Sequence
(BLAST)

001: MGSPAHKRPS GSGGGGGLPT STSQNGGGGR GGRGVLPRGR QMQKTFNNIK ITILCGFVTI LVLRGTIGVG NLGSSSADAV NQNIIEETNR ILAEIRSDSD
101: PTDLEGPQET EMSTNETYAL GPKITDWDSQ RKVWLDKNPE FPSTVNGKAR ILLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRLHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEV EWIWWMDSDA LFTDILFQIP LVRYEKHNLV IHGYPDLLFD QKSWIALNTG SFLLRNCQWS LDLLDAWAPM GPKGPIRDEA
301: GKVLTAYLKG RPAFEADDQS ALIYLLLSQK DTWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFVTHFVG CKPCGSYADY AVERCLKSME
401: RTFNFACNQV LKLYGFGHRG LLSPKIKRIR NETVTPLEFV DKFDIRRTTQ VETKPQN

Best Arabidopsis Sequence Match ( AT1G74380.1 )
(BLAST)

001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

Arabidopsis Description

XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.