Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 1
- cytosol 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr10P... | golgi |
GSMUA_Achr10P... | golgi |
GSMUA_Achr11P... | golgi |
GSMUA_Achr3P22760_001 | golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr10P... | Banana | cytosol | 81.48 | 86.18 |
HORVU6Hr1G040960.1 | Barley | cytosol | 41.61 | 79.58 |
CDX73082 | Canola | cytosol | 37.91 | 78.38 |
CDX96540 | Canola | cytosol | 37.91 | 78.38 |
CDX68187 | Canola | cytosol | 37.47 | 77.13 |
CDX85826 | Canola | cytosol | 37.47 | 77.13 |
Bra008146.1-P | Field mustard | cytosol | 37.25 | 76.68 |
CDY49114 | Canola | peroxisome | 23.09 | 75.71 |
GSMUA_Achr11P... | Banana | cytosol | 81.05 | 73.23 |
PGSC0003DMT400073000 | Potato | cytosol | 36.82 | 70.12 |
GSMUA_Achr10P... | Banana | plastid | 74.95 | 68.25 |
VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 66.88 | 68.22 |
KRH03516 | Soybean | mitochondrion | 64.92 | 66.67 |
KRH56886 | Soybean | endoplasmic reticulum | 64.71 | 66.44 |
Zm00001d016687_P001 | Maize | plasma membrane | 68.85 | 66.11 |
Bra015915.1-P | Field mustard | plastid | 65.58 | 66.01 |
PGSC0003DMT400063414 | Potato | plastid | 64.49 | 65.78 |
AT1G74380.1 | Thale cress | plastid | 65.36 | 65.65 |
EES06903 | Sorghum | plastid | 68.63 | 65.62 |
Solyc03g115740.1.1 | Tomato | plastid | 64.05 | 65.33 |
AT5G07720.1 | Thale cress | cytosol, plastid | 64.92 | 65.21 |
Os02t0529600-01 | Rice | golgi, peroxisome, plastid | 67.97 | 65.0 |
PGSC0003DMT400041333 | Potato | plastid | 64.27 | 64.98 |
CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 64.27 | 64.98 |
Bra009305.1-P | Field mustard | cytosol | 64.27 | 64.84 |
CDX69995 | Canola | cytosol | 64.27 | 64.84 |
Bra003804.1-P | Field mustard | plastid | 64.49 | 64.77 |
TraesCS6D01G181200.1 | Wheat | plastid | 66.88 | 64.23 |
TraesCS6A01G196600.1 | Wheat | plastid | 66.88 | 64.23 |
TraesCS6B01G221000.1 | Wheat | plastid | 66.88 | 64.23 |
TraesCS5A01G129800.1 | Wheat | mitochondrion | 61.22 | 63.15 |
TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 61.22 | 63.15 |
TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 61.0 | 62.92 |
HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 60.13 | 62.3 |
CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 59.04 | 59.96 |
Os12t0149300-01 | Rice | golgi | 60.78 | 59.87 |
Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 57.95 | 59.51 |
Zm00001d023399_P001 | Maize | golgi, mitochondrion | 57.52 | 57.89 |
Zm00001d023417_P001 | Maize | golgi, mitochondrion | 57.3 | 57.68 |
CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 60.35 | 57.47 |
EES16639 | Sorghum | golgi | 57.73 | 56.99 |
GSMUA_Achr8P22410_001 | Banana | golgi, mitochondrion | 53.16 | 56.88 |
GSMUA_Achr1P24760_001 | Banana | mitochondrion | 52.51 | 55.79 |
Bra025677.1-P | Field mustard | golgi, mitochondrion, plasma membrane, plastid | 60.13 | 54.87 |
AT1G18690.4 | Thale cress | golgi, plastid | 61.0 | 54.58 |
Zm00001d043041_P001 | Maize | nucleus | 27.89 | 43.39 |
EES15672 | Sorghum | mitochondrion | 48.58 | 43.3 |
GSMUA_Achr3P30030_001 | Banana | golgi | 36.38 | 42.07 |
Zm00001d023398_P001 | Maize | mitochondrion | 46.84 | 41.91 |
GSMUA_Achr3P30020_001 | Banana | cytosol, golgi, plastid | 36.82 | 38.06 |
GSMUA_Achr1P12580_001 | Banana | golgi, plastid, vacuole | 35.08 | 36.18 |
Zm00001d023418_P001 | Maize | nucleus | 46.62 | 20.76 |
Protein Annotations
EnsemblPlants:GSMUA_Achr3P22760_001 | EnsemblPlants:GSMUA_Achr3T22760_001 | EnsemblPlantsGene:GSMUA_Achr3G22760_001 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 |
InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF4 | PFAM:PF05637 | SEG:seg |
UniParc:UPI00029611B4 | UniProt:M0SGZ2 | MapMan:21.2.1.1.2 | : | : | : |
Description
Putative glycosyltransferase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22760_001]
Coordinates
chr3:+:23603398..23608357
Molecular Weight (calculated)
52238.4 Da
IEP (calculated)
8.449
GRAVY (calculated)
-0.423
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHEATGFRP PTAARDRPDA GAAAPRSRIP RRRQIRKTFN NLKVTILCGV VTILVLRGTI RSDSDPDDED QIHSGFNSTT ATALNYTSSD ALFAAAAANY
101: TLGPKIFDWD VQRRRWLAEN RGFPSQTPAG KPRIILVTGS PPNPCDNPIG DHYLLKGTKN KIDYCRLHGI EIVYNMAHLD RELAGYWAKL PLIRRLMLSH
201: PEVEWIWWMD SDALFTDMAF EIPLDRYAAH NLVVHGYPDL IFEKHSWIGL NTGSFLLRNC QWSLDLLDAW APMGPKGPIR DEAGKMLTAN LKGRPAFEAD
301: DQSALIYLLL SQQDRWGDKI YIENSYYLHG YWAGLVDRYE EMMEKYHPGL GDERWPFVTH FVGCKPCGSY GDYPVKRCLR SMERAFNFAD NQVLRMYGFA
401: HGNLASPKIR RTEKQTAKPL EFLDQLNLEA RVETRGAKIT HHFSVLKNGK VLCYGDSRC
101: TLGPKIFDWD VQRRRWLAEN RGFPSQTPAG KPRIILVTGS PPNPCDNPIG DHYLLKGTKN KIDYCRLHGI EIVYNMAHLD RELAGYWAKL PLIRRLMLSH
201: PEVEWIWWMD SDALFTDMAF EIPLDRYAAH NLVVHGYPDL IFEKHSWIGL NTGSFLLRNC QWSLDLLDAW APMGPKGPIR DEAGKMLTAN LKGRPAFEAD
301: DQSALIYLLL SQQDRWGDKI YIENSYYLHG YWAGLVDRYE EMMEKYHPGL GDERWPFVTH FVGCKPCGSY GDYPVKRCLR SMERAFNFAD NQVLRMYGFA
401: HGNLASPKIR RTEKQTAKPL EFLDQLNLEA RVETRGAKIT HHFSVLKNGK VLCYGDSRC
001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
Arabidopsis Description
XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.