Factsheet for Os12t0149300-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
golgi 2
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, golgi, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0529600-01	golgi
Os12t0149300-01	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G74380.1	Os02t0529600-01	AT1G74380.1	22665445
AT1G74380.1	Os12t0149300-01	AT1G74380.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	77.04	81.04
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	76.82	80.45
TraesCS5A01G129800.1	Wheat	mitochondrion	76.61	80.22
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	76.39	80.0
CDY49114	Canola	peroxisome	22.1	73.57
CDX96540	Canola	cytosol	34.98	73.42
CDX73082	Canola	cytosol	34.98	73.42
CDX68187	Canola	cytosol	34.98	73.09
CDX85826	Canola	cytosol	34.98	73.09
Bra008146.1-P	Field mustard	cytosol	34.55	72.2
EES16639	Sorghum	golgi	67.6	67.74
Zm00001d023417_P001	Maize	golgi, mitochondrion	65.67	67.11
Zm00001d023399_P001	Maize	golgi, mitochondrion	65.45	66.89
PGSC0003DMT400073000	Potato	cytosol	34.55	66.81
Os02t0529600-01	Rice	golgi, peroxisome, plastid	67.38	65.42
GSMUA_Achr10P...	Banana	cytosol	59.87	64.29
Bra015915.1-P	Field mustard	plastid	62.02	63.38
PGSC0003DMT400063414	Potato	plastid	61.16	63.33
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	61.16	63.33
AT1G74380.1	Thale cress	plastid	61.8	63.02
Bra003804.1-P	Field mustard	plastid	61.8	63.02
AT5G07720.1	Thale cress	cytosol, plastid	61.37	62.58
Solyc03g115740.1.1	Tomato	plastid	60.09	62.22
KRH03516	Soybean	mitochondrion	59.66	62.19
KRH56886	Soybean	endoplasmic reticulum	59.44	61.97
PGSC0003DMT400041333	Potato	plastid	60.3	61.89
CDX99024	Canola	cytosol, golgi, peroxisome, plastid	59.87	61.45
Bra009305.1-P	Field mustard	cytosol	59.44	60.88
GSMUA_Achr3P22760_001	Banana	cytosol	59.87	60.78
CDX69995	Canola	cytosol	59.23	60.66
CDY19235	Canola	cytosol, golgi, plasma membrane, plastid	58.8	60.62
Os03t0300000-01	Rice	cytosol	44.64	59.77
CDY26738	Canola	golgi, mitochondrion, plasma membrane, plastid	60.09	58.09
GSMUA_Achr10P...	Banana	plastid	61.8	57.14
GSMUA_Achr11P...	Banana	cytosol	61.8	56.69
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	54.29	56.6
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	59.87	55.47
AT1G18690.4	Thale cress	golgi, plastid	58.15	52.83
EES15672	Sorghum	mitochondrion	57.08	51.65
Zm00001d023398_P001	Maize	mitochondrion	56.22	51.07
Zm00001d043041_P001	Maize	nucleus	30.26	47.8
Os03t0306100-00	Rice	golgi	43.56	45.21
Os03t0305800-02	Rice	golgi	43.56	42.03
Os02t0723200-01	Rice	mitochondrion	32.4	33.78
Os11t0546500-00	Rice	golgi, peroxisome, plastid	32.4	31.26
Zm00001d023418_P001	Maize	nucleus	55.15	24.93

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	UniProt:A0A0P0Y765	ProteinID:BAT15904.1	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768
GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009969	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0016758	InterPro:Glyco_trans_34	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os12g0149300	EnsemblPlants:Os12t0149300-01
PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF8	TMHMM:TMhelix	UniParc:UPI000393A0A5	SEG:seg

Description

glycosyltransferase 3Similar to galactosyl transferase GMA12/MNN10 family protein. (Os12t0149300-01)

Coordinates

chr12:-:2433326..2434865

Molecular Weight (calculated)

52426.6 Da

IEP (calculated)

8.029

GRAVY (calculated)

-0.398

Length

466 amino acids

Sequence
(BLAST)

001: CVAMAVTGGG RPAVRQQAAR GKQMQRTFNN VKITLICGFI TLLVLRGTVG INLLTYGVGG GGGSDAVAAA EEARVVEDIE RILREIRSDT DDDDDDEEEE
101: PLGVDASTTT TTNSTTTTAT AARRRSSNHT YTLGPKVTRW NAKRRQWLSR NPGFPSRDAR GKPRILLVTG SQPAPCDDAA GDHYLLKATK NKIDYCRIHG
201: IEIVHSMAHL DRELAGYWAK LPLLRRLMLS HPEVEWVWWM DSDALFTDMA FELPLARYDT SNLVIHGYPE LLFAKRSWIA LNTGSFLLRN CQWSLELLDA
301: WAPMGPKGRV RDEAGKVLTA SLTGRPAFEA DDQSALIHIL LTQKERWMEK VYVEDKYFLH GFWAGLVDKY EEMMERHHPG LGDERWPFVT HFVGCKPCGG
401: YGDYPRERCL GGMERAFNFA DNQVLRLYGF RHRSLASARV RRVANRTDNP LVNKEAALKM DAKIES

Best Arabidopsis Sequence Match ( AT5G07720.1 )
(BLAST)

001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS

Arabidopsis Description

XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.