Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G74380.1 | CDX68187 | AT1G74380.1 | 22665445 |
| AT1G74380.1 | CDX73082 | AT1G74380.1 | 22665445 |
| AT1G74380.1 | CDX85826 | AT1G74380.1 | 22665445 |
| AT1G74380.1 | CDX96540 | AT1G74380.1 | 22665445 |
| AT1G74380.1 | CDY49114 | AT1G74380.1 | 22665445 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85826 | Canola | cytosol | 100.0 | 100.0 |
| CDX73082 | Canola | cytosol | 96.86 | 97.3 |
| CDX96540 | Canola | cytosol | 96.86 | 97.3 |
| CDY49114 | Canola | peroxisome | 54.26 | 86.43 |
| HORVU6Hr1G040960.1 | Barley | cytosol | 70.4 | 65.42 |
| PGSC0003DMT400073000 | Potato | cytosol | 69.51 | 64.32 |
| CDY11442 | Canola | cytosol, extracellular, mitochondrion, plastid | 18.83 | 49.41 |
| Bra003804.1-P | Field mustard | plastid | 99.1 | 48.36 |
| AT1G74380.1 | Thale cress | plastid | 97.31 | 47.48 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 88.34 | 43.39 |
| CDX69995 | Canola | cytosol | 88.34 | 43.3 |
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 87.0 | 42.92 |
| VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 86.55 | 42.89 |
| CDY11443 | Canola | cytosol | 11.21 | 42.37 |
| CDX76657 | Canola | mitochondrion | 36.32 | 42.19 |
| KRH03516 | Soybean | mitochondrion | 84.3 | 42.06 |
| KRH56886 | Soybean | endoplasmic reticulum | 84.3 | 42.06 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 90.58 | 41.91 |
| PGSC0003DMT400041333 | Potato | plastid | 81.17 | 39.87 |
| PGSC0003DMT400063414 | Potato | plastid | 79.82 | 39.56 |
| GSMUA_Achr10P... | Banana | cytosol | 76.68 | 39.4 |
| Solyc03g115740.1.1 | Tomato | plastid | 78.92 | 39.11 |
| CDY18017 | Canola | mitochondrion | 58.74 | 39.1 |
| Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 77.58 | 38.7 |
| GSMUA_Achr3P22760_001 | Banana | cytosol | 77.13 | 37.47 |
| Zm00001d016687_P001 | Maize | plasma membrane | 78.92 | 36.82 |
| EES06903 | Sorghum | plastid | 78.92 | 36.67 |
| Os02t0529600-01 | Rice | golgi, peroxisome, plastid | 78.48 | 36.46 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 72.65 | 36.4 |
| TraesCS6A01G196600.1 | Wheat | plastid | 77.58 | 36.19 |
| TraesCS6D01G181200.1 | Wheat | plastid | 77.58 | 36.19 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 72.2 | 36.18 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 72.2 | 36.18 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 71.75 | 36.12 |
| TraesCS6B01G221000.1 | Wheat | plastid | 77.13 | 35.98 |
| Os12t0149300-01 | Rice | golgi | 73.09 | 34.98 |
| GSMUA_Achr10P... | Banana | plastid | 77.58 | 34.33 |
| GSMUA_Achr11P... | Banana | cytosol | 76.68 | 33.66 |
| CDY22055 | Canola | mitochondrion | 67.71 | 33.63 |
| CDX90935 | Canola | mitochondrion | 67.26 | 33.41 |
| EES16639 | Sorghum | golgi | 66.37 | 31.83 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 65.02 | 31.8 |
| CDY50378 | Canola | cytosol | 66.82 | 31.77 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 64.57 | 31.58 |
| CDY65940 | Canola | mitochondrion | 37.22 | 31.2 |
| CDX97271 | Canola | mitochondrion | 37.22 | 30.86 |
| CDY70418 | Canola | golgi, mitochondrion | 62.33 | 30.22 |
| CDX93965 | Canola | mitochondrion | 61.88 | 30.13 |
| CDY70090 | Canola | mitochondrion | 39.91 | 25.14 |
| EES15672 | Sorghum | mitochondrion | 57.85 | 25.05 |
| Zm00001d023398_P001 | Maize | mitochondrion | 56.5 | 24.56 |
| CDY29577 | Canola | golgi | 37.67 | 19.18 |
| Zm00001d043041_P001 | Maize | nucleus | 25.11 | 18.98 |
| CDX72649 | Canola | golgi | 37.22 | 18.95 |
| CDY49440 | Canola | golgi | 37.22 | 18.53 |
| CDX76887 | Canola | golgi, plastid | 37.22 | 18.53 |
| Zm00001d023418_P001 | Maize | nucleus | 57.4 | 12.42 |
| CDY11441 | Canola | mitochondrion | 0.9 | 1.06 |
Protein Annotations
| EnsemblPlants:CDX68187 | EnsemblPlantsGene:GSBRNA2T00099447001 | GO:A0A078D987 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | PANTHER:PTHR31311 |
| PANTHER:PTHR31311:SF4 | PFAM:PF05637 | ProteinID:CDX68187 | ProteinID:CDX68187.1 | UniParc:UPI0004EEA19E | MapMan:35.1 |
Description
BnaA07g22270D
Coordinates
chrLK031787:-:4350893..4351690
Molecular Weight (calculated)
25931.3 Da
IEP (calculated)
7.970
GRAVY (calculated)
-0.417
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHLDKELAG YWAKLPMIRR LMLSHPEKSW IALNTGSFLL RNCQWSLDLL DAWAPMGPKG PIRDEAGKVL TAYLKGRPAF EADDQSALIY LLLSQKDTWM
101: EKVFVENQYY LHGFWEGLVD KYEEMMEKYH PGLGDERWPF VTHFVGCKPC GSYADYAVER CLKSMERAFN FADNQVLKLY GFGHRGLLSP KIKRIRNETV
201: TPLEFVDKFD IRRTTQVETK PQN
101: EKVFVENQYY LHGFWEGLVD KYEEMMEKYH PGLGDERWPF VTHFVGCKPC GSYADYAVER CLKSMERAFN FADNQVLKLY GFGHRGLLSP KIKRIRNETV
201: TPLEFVDKFD IRRTTQVETK PQN
001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
Arabidopsis Description
XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]
SUBAcon: [golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.