Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 1
- mitochondrion 2
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49114 | Canola | peroxisome | 43.53 | 26.43 |
| CDX73082 | Canola | cytosol | 49.41 | 18.92 |
| CDX96540 | Canola | cytosol | 49.41 | 18.92 |
| CDX68187 | Canola | cytosol | 49.41 | 18.83 |
| CDX85826 | Canola | cytosol | 49.41 | 18.83 |
| Zm00001d026023_P001 | Maize | endoplasmic reticulum, golgi | 54.12 | 17.36 |
| CDY65940 | Canola | mitochondrion | 52.94 | 16.92 |
| CDX97271 | Canola | mitochondrion | 52.94 | 16.73 |
| CDY18017 | Canola | mitochondrion | 57.65 | 14.63 |
| Os03t0300000-01 | Rice | cytosol | 55.29 | 13.51 |
| Zm00001d025851_P001 | Maize | cytosol | 55.29 | 12.98 |
| CDY70090 | Canola | mitochondrion | 51.76 | 12.43 |
| Zm00001d035801_P001 | Maize | mitochondrion, nucleus, plastid | 27.06 | 11.92 |
| Zm00001d051264_P001 | Maize | mitochondrion, plastid | 54.12 | 11.59 |
| AT3G62720.1 | Thale cress | mitochondrion | 60.0 | 11.09 |
| PGSC0003DMT400058812 | Potato | mitochondrion | 60.0 | 10.99 |
| CDX93965 | Canola | mitochondrion | 58.82 | 10.92 |
| CDX90935 | Canola | mitochondrion | 57.65 | 10.91 |
| CDY22055 | Canola | mitochondrion | 57.65 | 10.91 |
| Bra014396.1-P | Field mustard | mitochondrion | 58.82 | 10.89 |
| GSMUA_Achr1P24760_001 | Banana | mitochondrion | 55.29 | 10.88 |
| GSMUA_Achr8P22410_001 | Banana | golgi, mitochondrion | 54.12 | 10.72 |
| KRH37112 | Soybean | golgi, mitochondrion | 56.47 | 10.67 |
| CDY70418 | Canola | golgi, mitochondrion | 57.65 | 10.65 |
| VIT_07s0005g00150.t01 | Wine grape | mitochondrion | 56.47 | 10.62 |
| KRG96428 | Soybean | mitochondrion | 56.47 | 10.55 |
| EER92398 | Sorghum | golgi | 55.29 | 10.54 |
| VIT_05s0020g01530.t01 | Wine grape | mitochondrion | 57.65 | 10.52 |
| Zm00001d028811_P001 | Maize | plasma membrane | 55.29 | 10.51 |
| Zm00001d047694_P001 | Maize | golgi | 55.29 | 10.49 |
| TraesCS4D01G189500.1 | Wheat | golgi, mitochondrion | 55.29 | 10.42 |
| TraesCS4B01G188100.1 | Wheat | golgi, mitochondrion | 55.29 | 10.42 |
| TraesCS4A01G116100.2 | Wheat | golgi, mitochondrion | 55.29 | 10.4 |
| HORVU4Hr1G054910.1 | Barley | golgi, mitochondrion | 55.29 | 10.4 |
| CDY50378 | Canola | cytosol | 56.47 | 10.23 |
| TraesCS1B01G115300.1 | Wheat | golgi, mitochondrion | 55.29 | 10.06 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 51.76 | 9.69 |
| CDX69995 | Canola | cytosol | 50.59 | 9.45 |
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 49.41 | 9.29 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 49.41 | 8.71 |
| CDX76657 | Canola | mitochondrion | 18.82 | 8.33 |
| CDX76887 | Canola | golgi, plastid | 32.94 | 6.25 |
| CDY49440 | Canola | golgi | 32.94 | 6.25 |
| CDY29577 | Canola | golgi | 30.59 | 5.94 |
| CDX72649 | Canola | golgi | 29.41 | 5.71 |
| KRH12052 | Soybean | mitochondrion | 12.94 | 4.12 |
| CDY11443 | Canola | cytosol | 1.18 | 1.69 |
| CDY11441 | Canola | mitochondrion | 3.53 | 1.59 |
| Solyc01g067930.2.1 | Tomato | mitochondrion | 2.35 | 0.95 |
| KRH68171 | Soybean | golgi, mitochondrion | 1.18 | 0.41 |
Protein Annotations
| EnsemblPlants:CDY11442 | EnsemblPlantsGene:GSBRNA2T00049510001 | GO:A0A078FEL5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | PANTHER:PTHR31311 |
| PANTHER:PTHR31311:SF5 | PFAM:PF05637 | ProteinID:CDY11442 | ProteinID:CDY11442.1 | UniParc:UPI0004EE080D | UniProt:A0A078FEL5 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA09g40080DBnaA09g40080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEL5]
Coordinates
chrLK032011:+:395346..395659
Molecular Weight (calculated)
9319.0 Da
IEP (calculated)
4.241
GRAVY (calculated)
-0.295
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MVYEQKNWIG LNTGSFLLRN SQWALDLLDA WAPMGPKGKV REEAVGDGLS FSYGEGEMGR ESVSGEWLLL ARLLGDFGGP VRGDD
001: MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT
Arabidopsis Description
XXT1XXT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VEJ0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.