Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016687_P001 | golgi, golgi |
| Zm00001d023398_P001 | golgi, golgi |
| Zm00001d023399_P001 | golgi, golgi |
| Zm00001d023417_P001 | golgi, golgi |
| Zm00001d023418_P001 | golgi, golgi |
| Zm00001d025851_P001 | golgi, golgi |
| Zm00001d026023_P001 | golgi, golgi |
| Zm00001d028811_P001 | golgi, golgi |
| Zm00001d035801_P001 | golgi, golgi |
| Zm00001d043041_P001 | golgi, golgi |
| Zm00001d047694_P001 | golgi, golgi |
| Zm00001d051264_P001 | golgi, golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11443 | Canola | cytosol | 17.74 | 79.66 |
| Os03t0300000-01 | Rice | cytosol | 92.08 | 70.11 |
| Zm00001d025851_P001 | Maize | cytosol | 88.68 | 64.92 |
| CDX76657 | Canola | mitochondrion | 46.79 | 64.58 |
| Zm00001d051264_P001 | Maize | mitochondrion, plastid | 96.23 | 64.23 |
| CDY18017 | Canola | mitochondrion | 74.72 | 59.1 |
| Zm00001d047694_P001 | Maize | golgi | 98.11 | 58.04 |
| Zm00001d028811_P001 | Maize | plasma membrane | 97.74 | 57.94 |
| EER92398 | Sorghum | golgi | 96.98 | 57.62 |
| CDY11442 | Canola | cytosol, extracellular, mitochondrion, plastid | 17.36 | 54.12 |
| GSMUA_Achr8P22410_001 | Banana | golgi, mitochondrion | 87.17 | 53.85 |
| HORVU4Hr1G054910.1 | Barley | golgi, mitochondrion | 90.57 | 53.1 |
| GSMUA_Achr1P24760_001 | Banana | mitochondrion | 86.42 | 53.01 |
| TraesCS4B01G188100.1 | Wheat | golgi, mitochondrion | 90.19 | 52.99 |
| TraesCS4A01G116100.2 | Wheat | golgi, mitochondrion | 90.19 | 52.88 |
| TraesCS4D01G189500.1 | Wheat | golgi, mitochondrion | 89.81 | 52.77 |
| CDY22055 | Canola | mitochondrion | 86.42 | 51.0 |
| CDX90935 | Canola | mitochondrion | 86.04 | 50.78 |
| TraesCS1B01G115300.1 | Wheat | golgi, mitochondrion | 89.43 | 50.75 |
| KRH37112 | Soybean | golgi, mitochondrion | 85.28 | 50.22 |
| KRG96428 | Soybean | mitochondrion | 86.04 | 50.11 |
| Bra036262.1-P | Field mustard | mitochondrion | 86.42 | 49.57 |
| VIT_07s0005g00150.t01 | Wine grape | mitochondrion | 84.53 | 49.56 |
| AT4G02500.1 | Thale cress | mitochondrion | 86.04 | 49.46 |
| Bra000877.1-P | Field mustard | mitochondrion | 86.04 | 49.24 |
| Bra018545.1-P | Field mustard | mitochondrion | 85.28 | 48.92 |
| CDY50378 | Canola | cytosol | 85.66 | 48.4 |
| PGSC0003DMT400058812 | Potato | mitochondrion | 84.53 | 48.28 |
| VIT_05s0020g01530.t01 | Wine grape | mitochondrion | 84.15 | 47.85 |
| AT3G62720.1 | Thale cress | mitochondrion | 83.02 | 47.83 |
| Bra007696.1-P | Field mustard | mitochondrion | 82.26 | 47.81 |
| CDX93965 | Canola | mitochondrion | 80.75 | 46.72 |
| Bra014396.1-P | Field mustard | mitochondrion | 80.0 | 46.19 |
| CDY70418 | Canola | golgi, mitochondrion | 80.0 | 46.09 |
| CDY65940 | Canola | mitochondrion | 44.53 | 44.36 |
| CDX97271 | Canola | mitochondrion | 44.53 | 43.87 |
| Zm00001d047647_P001 | Maize | mitochondrion | 59.25 | 42.32 |
| Zm00001d035801_P001 | Maize | mitochondrion, nucleus, plastid | 28.3 | 38.86 |
| CDY70090 | Canola | mitochondrion | 50.94 | 38.14 |
| Zm00001d039763_P001 | Maize | golgi, mitochondrion | 61.51 | 36.3 |
| Zm00001d016687_P001 | Maize | plasma membrane | 61.13 | 33.89 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 55.85 | 32.46 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 55.47 | 32.24 |
| Zm00001d028874_P001 | Maize | golgi | 55.09 | 32.09 |
| Zm00001d052625_P001 | Maize | plastid | 44.53 | 26.76 |
| Zm00001d023398_P001 | Maize | mitochondrion | 51.32 | 26.51 |
| Zm00001d051681_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 44.15 | 26.35 |
| Zm00001d052627_P001 | Maize | plastid | 41.89 | 24.24 |
| Zm00001d052628_P001 | Maize | plasma membrane | 43.4 | 24.01 |
| KRH12052 | Soybean | mitochondrion | 24.15 | 23.97 |
| Zm00001d047648_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 24.91 | 23.83 |
| Zm00001d043041_P001 | Maize | nucleus | 25.28 | 22.71 |
| Zm00001d047657_P001 | Maize | mitochondrion | 14.72 | 21.91 |
| Zm00001d047654_P001 | Maize | golgi, plasma membrane | 13.21 | 16.75 |
| KRH68171 | Soybean | golgi, mitochondrion | 14.72 | 16.18 |
| Zm00001d023418_P001 | Maize | nucleus | 50.94 | 13.09 |
| Solyc01g067930.2.1 | Tomato | mitochondrion | 2.64 | 3.33 |
| CDY11441 | Canola | mitochondrion | 1.51 | 2.12 |
Protein Annotations
| EnsemblPlants:Zm00001d026023_P001 | EnsemblPlants:Zm00001d026023_T001 | EnsemblPlantsGene:Zm00001d026023 | EntrezGene:103641926 | Gene3D:3.90.550.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:Glyco_trans_34 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF6 | PFAM:PF05637 |
| ProteinID:AQK45331.1 | UniParc:UPI0004DEC3C2 | UniProt:A0A1D6JBS3 | MapMan:35.1 | : | : |
Description
Xyloglucan 6-xylosyltransferase 2
Coordinates
chr10:+:136263893..136264969
Molecular Weight (calculated)
30870.1 Da
IEP (calculated)
6.312
GRAVY (calculated)
-0.395
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLDAEMVG FWAKLPLMRA LLLAHPEVEF LWWMDSDTMF TDMAFELPWE RYGPHNLIMH GWDEMVYDDK NWIGLNTGSF LLRNCQWSLD MLDTWAPMGP
101: KGPVRIEAGK VLTKSLKDRP VFEADDQSAM VYILATQREK WGDKVYLENG YYLHSYWGIL VDRYEETLEN YKPGLGDHRW PLVTHFVGCK PCGKFGDYPV
201: ERCLKNMDRA FNFGDNQILQ MYGFTHKSLA SRRVKRIRNE TSNPLETKDE LGLLHPAFKA VKTST
101: KGPVRIEAGK VLTKSLKDRP VFEADDQSAM VYILATQREK WGDKVYLENG YYLHSYWGIL VDRYEETLEN YKPGLGDHRW PLVTHFVGCK PCGKFGDYPV
201: ERCLKNMDRA FNFGDNQILQ MYGFTHKSLA SRRVKRIRNE TSNPLETKDE LGLLHPAFKA VKTST
001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN
Arabidopsis Description
XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.