Factsheet for Zm00001d052625_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08636	Sorghum	plastid	90.48	88.86
Zm00001d052627_P001	Maize	plastid	73.92	71.18
TraesCSU01G194500.1	Wheat	golgi	69.61	67.03
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	71.2	66.24
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	70.98	66.03
TraesCS6B01G078800.1	Wheat	plastid	70.75	65.96
Zm00001d052628_P001	Maize	plasma membrane	71.43	65.76
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	70.29	64.72
Os11t0546500-00	Rice	golgi, peroxisome, plastid	70.75	64.6
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	56.46	56.08
PGSC0003DMT400023470	Potato	endoplasmic reticulum	33.56	54.81
AT4G38310.1	Thale cress	nucleus	14.74	54.17
GSMUA_Achr3P30030_001	Banana	golgi	48.53	53.9
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	50.79	50.45
Solyc03g043920.2.1	Tomato	golgi	46.49	49.52
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	48.3	47.44
PGSC0003DMT400055223	Potato	golgi	47.17	47.27
KRH28334	Soybean	plastid	48.07	46.9
Bra017847.1-P	Field mustard	golgi	46.49	46.8
CDX72649	Canola	golgi	46.26	46.58
CDY29577	Canola	golgi	46.26	46.58
AT4G37690.1	Thale cress	golgi	45.35	46.3
AT2G22900.1	Thale cress	plastid	46.71	45.88
CDY49440	Canola	golgi	46.26	45.54
CDX76887	Canola	golgi, plastid	46.26	45.54
Bra039938.1-P	Field mustard	golgi, plastid	46.26	45.54
Zm00001d047647_P001	Maize	mitochondrion	38.1	45.28
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	26.76	44.53
VIT_00s0322g00030.t01	Wine grape	mitochondrion	34.24	44.02
Zm00001d025851_P001	Maize	cytosol	32.43	39.5
Zm00001d051264_P001	Maize	mitochondrion, plastid	34.92	38.79
Zm00001d039763_P001	Maize	golgi, mitochondrion	37.41	36.75
Zm00001d028811_P001	Maize	plasma membrane	36.96	36.47
Zm00001d047694_P001	Maize	golgi	36.96	36.38
Zm00001d028874_P001	Maize	golgi	36.05	34.95
Zm00001d023417_P001	Maize	golgi, mitochondrion	35.6	34.43
Zm00001d023399_P001	Maize	golgi, mitochondrion	35.6	34.43
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	14.51	33.16
Zm00001d016687_P001	Maize	plasma membrane	35.6	32.85
Zm00001d043041_P001	Maize	nucleus	20.41	30.51
Zm00001d047657_P001	Maize	mitochondrion	11.79	29.21
Zm00001d023398_P001	Maize	mitochondrion	32.88	28.27
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	17.46	27.8
Zm00001d047654_P001	Maize	golgi, plasma membrane	13.15	27.75
Zm00001d023418_P001	Maize	nucleus	32.88	14.06

Protein Annotations

EntrezGene:103654388	MapMan:21.2.3.1.3	Gene3D:3.90.550.10	ProteinID:AQK57543.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	UniProt:K7U776	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF10
TMHMM:TMhelix	UniParc:UPI000220FFB8	EnsemblPlantsGene:Zm00001d052625	EnsemblPlants:Zm00001d052625_P001	EnsemblPlants:Zm00001d052625_T001	SEG:seg

Description

Glycosyltransferase 6

Coordinates

chr4:+:195168030..195169355

Molecular Weight (calculated)

49060.2 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.341

Length

441 amino acids

Sequence
(BLAST)

001: MAASEAAASA ASKKGVAPAR PSRARDLVVF ATGVAAAVLA FVGPASVLAP GRAGLVAFPV PGPADGPRTF YDDPELSYAL GRRVTGWDAK RAQWLRSRGL
101: GDRRNAPERV VMVTGSQPEP CKGAGGDHLL LRFLKNKVDY CRLHGIELLY NNALLEPSMV AYWAKIPVVR AAMLAHPEAE WVWWVDADAV FTDMDFSLPL
201: ARYSRYNLVL YGWPEEVYEK RSWVGLNAGV FLIRNCQWSL DFMDEWASMG PASPEYARWG KTLRDTLSKK FDDQSDDQSA LAYLLLTNRE RWGKKTYLGI
301: DYYFQGYFAE IVDKLDGVAA RYEAAERKGD PALRRRHAER EHLRYAAARN AAVRAVVPGP DGGGQSGWRR PFVTHFTGCN PCGGKRNSIY TREICEDGMR
401: RALGFADDQV LRAYGFRHAA PLNDSVRALP FDYPAARARN N

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.