Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017847.1-P | Field mustard | golgi | 99.09 | 99.09 |
| CDY29577 | Canola | golgi | 98.86 | 98.86 |
| AT4G37690.1 | Thale cress | golgi | 87.67 | 88.89 |
| AT4G38310.1 | Thale cress | nucleus | 23.29 | 85.0 |
| CDX76887 | Canola | golgi, plastid | 77.85 | 76.12 |
| CDY49440 | Canola | golgi | 77.85 | 76.12 |
| PGSC0003DMT400023470 | Potato | endoplasmic reticulum | 36.99 | 60.0 |
| PGSC0003DMT400055223 | Potato | golgi | 58.68 | 58.41 |
| Solyc03g043920.2.1 | Tomato | golgi | 54.11 | 57.25 |
| KRH77153 | Soybean | golgi, nucleus, peroxisome, plastid | 56.39 | 55.01 |
| KRH28334 | Soybean | plastid | 56.62 | 54.87 |
| VIT_00s0322g00030.t01 | Wine grape | mitochondrion | 40.87 | 52.19 |
| GSMUA_Achr3P30030_001 | Banana | golgi | 46.58 | 51.39 |
| HORVU6Hr1G071920.1 | Barley | golgi | 49.32 | 50.59 |
| TraesCS6B01G315100.1 | Wheat | golgi, plasma membrane | 48.86 | 50.47 |
| GSMUA_Achr3P30020_001 | Banana | cytosol, golgi, plastid | 50.0 | 49.32 |
| Zm00001d051681_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 49.77 | 49.1 |
| EES07343 | Sorghum | golgi | 49.32 | 48.76 |
| Os02t0723200-01 | Rice | mitochondrion | 47.95 | 46.98 |
| Zm00001d052625_P001 | Maize | plastid | 46.58 | 46.26 |
| TraesCS6D01G266700.1 | Wheat | plastid | 48.4 | 46.09 |
| GSMUA_Achr1P12580_001 | Banana | golgi, plastid, vacuole | 45.43 | 44.72 |
| EES08636 | Sorghum | plastid | 45.66 | 44.54 |
| OQU83610 | Sorghum | cytosol, golgi, peroxisome, plastid | 47.49 | 43.42 |
| Zm00001d052628_P001 | Maize | plasma membrane | 46.58 | 42.59 |
| OQU83607 | Sorghum | plastid | 44.75 | 42.52 |
| Os11t0546500-00 | Rice | golgi, peroxisome, plastid | 46.8 | 42.44 |
| TraesCSU01G194500.1 | Wheat | golgi | 44.29 | 42.36 |
| Zm00001d052627_P001 | Maize | plastid | 44.06 | 42.14 |
| HORVU4Hr1G089670.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 44.98 | 41.56 |
| TraesCSU01G035200.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 44.29 | 40.93 |
| TraesCS6B01G078800.1 | Wheat | plastid | 44.06 | 40.8 |
| TraesCS4B01G391200.1 | Wheat | endoplasmic reticulum | 44.52 | 40.71 |
| CDX96540 | Canola | cytosol | 18.95 | 37.39 |
| CDX73082 | Canola | cytosol | 18.95 | 37.39 |
| CDX68187 | Canola | cytosol | 18.95 | 37.22 |
| CDX85826 | Canola | cytosol | 18.95 | 37.22 |
| CDY49114 | Canola | peroxisome | 11.87 | 37.14 |
| HORVU0Hr1G025530.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 20.09 | 35.63 |
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 36.3 | 35.18 |
| CDX69995 | Canola | cytosol | 36.3 | 34.95 |
| CDX99024 | Canola | cytosol, golgi, peroxisome, plastid | 35.62 | 34.36 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 36.76 | 33.4 |
| CDY70418 | Canola | golgi, mitochondrion | 34.47 | 32.83 |
| CDY70090 | Canola | mitochondrion | 26.48 | 32.77 |
| CDX93965 | Canola | mitochondrion | 34.02 | 32.53 |
| CDX90935 | Canola | mitochondrion | 33.33 | 32.52 |
| CDY22055 | Canola | mitochondrion | 32.88 | 32.07 |
| CDY50378 | Canola | cytosol | 32.88 | 30.7 |
| CDY11442 | Canola | cytosol, extracellular, mitochondrion, plastid | 5.71 | 29.41 |
| CDY18017 | Canola | mitochondrion | 21.0 | 27.46 |
| CDX97271 | Canola | mitochondrion | 16.44 | 26.77 |
| CDY11443 | Canola | cytosol | 3.42 | 25.42 |
| CDY65940 | Canola | mitochondrion | 15.3 | 25.19 |
| CDX76657 | Canola | mitochondrion | 10.96 | 25.0 |
| CDY11441 | Canola | mitochondrion | 9.82 | 22.75 |
Protein Annotations
| EnsemblPlants:CDX72649 | EnsemblPlantsGene:GSBRNA2T00100208001 | Gene3D:3.90.550.10 | GO:A0A078C8Z6 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 |
| InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF3 | PFAM:PF05637 | ProteinID:CDX72649 |
| ProteinID:CDX72649.1 | TMHMM:TMhelix | UniParc:UPI0004EE65D4 | MapMan:21.2.3.1.3 | : | : |
Description
BnaC07g46710D
Coordinates
chrLK031796:+:2376851..2378167
Molecular Weight (calculated)
50850.2 Da
IEP (calculated)
7.048
GRAVY (calculated)
-0.454
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHGGAKTR TAVCFRDGVI FFAGAFMSLI LVWSYFSIFS PSSNFTLIGF RRGTEPAKCS GFDMQFDPED PGSFYDDPDL SYSIERPITG WDEKRKQWLE
101: SHPSFKPGSE NRIVMVTGSQ PAPCKNPIGD HLLLRCFKNK VDYCRIHGHD IFYSNSLLHP KMNSYWTKLP AVKAAMLAHP EAEWIWWVDS DAIFTDMEFT
201: LPLHRYRYHN LVVHGWPSII YDQQSWTAVN AGVFLIRNCQ WSMELIDTWK SMGPVSPDYA KWGPIQRSIF KDKLFPESDD QTALIYLLYK HKEVYYPKIY
301: LEAEYYFQGY WIGVVGGFFA NVTERYLEME REDATLRRRH AEKVSERYGA FREERFLKGE FGGRGSRRRA FVTHFTGCQP CSGDHNPSYD GDTCWNEMIR
401: ALNFADNQVM RAYGYVHSDL SKTSPLQPLP FGYPDETW
101: SHPSFKPGSE NRIVMVTGSQ PAPCKNPIGD HLLLRCFKNK VDYCRIHGHD IFYSNSLLHP KMNSYWTKLP AVKAAMLAHP EAEWIWWVDS DAIFTDMEFT
201: LPLHRYRYHN LVVHGWPSII YDQQSWTAVN AGVFLIRNCQ WSMELIDTWK SMGPVSPDYA KWGPIQRSIF KDKLFPESDD QTALIYLLYK HKEVYYPKIY
301: LEAEYYFQGY WIGVVGGFFA NVTERYLEME REDATLRRRH AEKVSERYGA FREERFLKGE FGGRGSRRRA FVTHFTGCQP CSGDHNPSYD GDTCWNEMIR
401: ALNFADNQVM RAYGYVHSDL SKTSPLQPLP FGYPDETW
001: MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW
Arabidopsis Description
GT6Glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG1]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.