CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
golgi 1
plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052628_P001	Maize	plasma membrane	89.98	89.98
Os11t0546500-00	Rice	golgi, peroxisome, plastid	69.31	68.74
TraesCSU01G194500.1	Wheat	golgi	65.14	68.12
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	67.22	67.93
EES08636	Sorghum	plastid	63.47	67.71
TraesCS6B01G078800.1	Wheat	plastid	66.39	67.23
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	67.22	67.22
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	65.76	66.46
OQU83607	Sorghum	plastid	60.96	63.34
EES07343	Sorghum	golgi	54.49	58.92
GSMUA_Achr3P30030_001	Banana	golgi	48.02	57.93
PGSC0003DMT400023470	Potato	endoplasmic reticulum	30.48	54.07
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	49.48	53.38
AT4G38310.1	Thale cress	nucleus	12.94	51.67
Solyc03g043920.2.1	Tomato	golgi	42.38	49.03
PGSC0003DMT400055223	Potato	golgi	44.26	48.18
Bra017847.1-P	Field mustard	golgi	43.63	47.72
CDY29577	Canola	golgi	43.42	47.49
CDX72649	Canola	golgi	43.42	47.49
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	43.84	46.77
AT4G37690.1	Thale cress	golgi	41.96	46.53
CDY49440	Canola	golgi	43.22	46.21
CDX76887	Canola	golgi, plastid	43.22	46.21
Bra039938.1-P	Field mustard	golgi, plastid	43.22	46.21
AT2G22900.1	Thale cress	plastid	43.01	45.88
KRH28334	Soybean	plastid	43.22	45.8
VIT_00s0322g00030.t01	Wine grape	mitochondrion	32.15	44.9
EES00270	Sorghum	golgi, mitochondrion	35.49	37.53
EER92376	Sorghum	golgi	34.45	37.0
EER92398	Sorghum	golgi	33.82	36.32
EER92377	Sorghum	golgi	32.57	34.98
EES16639	Sorghum	golgi	33.19	34.19
EES06903	Sorghum	plastid	33.61	33.54
EES15672	Sorghum	mitochondrion	32.15	29.9

Protein Annotations

EnsemblPlants:OQU83610	EnsemblPlantsGene:SORBI_3005G144500	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF10	PFAM:PF05637	ProteinID:OQU83610	ProteinID:OQU83610.1
SEG:seg	UniParc:UPI000B8BA377	UniProt:A0A1Z5RIK5	MapMan:21.2.3.1.3	:	:

Description

hypothetical protein

Coordinates

chr5:-:60905294..60907053

Molecular Weight (calculated)

52131.8 Da

IEP (calculated)

8.925

GRAVY (calculated)

-0.271

Length

479 amino acids

Sequence
(BLAST)

001: MAASESVPFC VKGGGGAPRP HGGHLVLPAG RVREGLAFAA GAVVAALVLL SSASVLAPPP VPNIVSLPVP SSSANADAAS SSPSASVAAV GKGPRTFYDD
101: PSLSYAVARR RRDITDWDAK RAAWLRTRGL DGASAAAGVA GRVVMVTGSQ PEPCKGPGGD HALLRFLKNK LDYCRLHGIE LLYNTALLEP SMVAYWAKIP
201: AVRAAMLAHP DAEWVWWVDA DAVFTDMDFS LPLHRYGGHN LVVYGWEREV YEERSWVGLN AGVFLIRNCQ WSLDLMDAWA RMGPASPEYA RWGKTLREEL
301: EGKPNDESDD QSALVYLLSR HPERARWSNA TFLESGYYFQ GYWAEIVDRL DGVAARYEAV ERGGVGRGLR RRHAEREHLL YAAARREAVR RRDGSGGGVP
401: GPDGGGQKGW RRPFVTHFTG CQPCGGAPNR MYTRKRCAEG IRRALAFADD QVLRAYGFRH AAPLSDSVAP LPFDYPAAH

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.