Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G38310.1 | Thale cress | nucleus | 25.46 | 91.67 |
| Bra017847.1-P | Field mustard | golgi | 89.35 | 88.13 |
| CDY29577 | Canola | golgi | 89.12 | 87.9 |
| CDX72649 | Canola | golgi | 88.89 | 87.67 |
| AT2G22900.1 | Thale cress | plastid | 75.23 | 72.38 |
| PGSC0003DMT400023470 | Potato | endoplasmic reticulum | 37.73 | 60.37 |
| Solyc03g043920.2.1 | Tomato | golgi | 55.79 | 58.21 |
| PGSC0003DMT400055223 | Potato | golgi | 59.03 | 57.95 |
| KRH28334 | Soybean | plastid | 59.03 | 56.42 |
| KRH77153 | Soybean | golgi, nucleus, peroxisome, plastid | 58.33 | 56.12 |
| VIT_00s0322g00030.t01 | Wine grape | mitochondrion | 40.51 | 51.02 |
| GSMUA_Achr3P30030_001 | Banana | golgi | 46.53 | 50.63 |
| HORVU6Hr1G071920.1 | Barley | golgi | 48.61 | 49.18 |
| TraesCS6B01G315100.1 | Wheat | golgi, plasma membrane | 47.92 | 48.82 |
| GSMUA_Achr3P30020_001 | Banana | cytosol, golgi, plastid | 49.77 | 48.42 |
| EES07343 | Sorghum | golgi | 49.07 | 47.86 |
| Zm00001d051681_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 49.07 | 47.75 |
| Os02t0723200-01 | Rice | mitochondrion | 48.15 | 46.53 |
| Zm00001d052625_P001 | Maize | plastid | 46.3 | 45.35 |
| TraesCS6D01G266700.1 | Wheat | plastid | 47.45 | 44.57 |
| GSMUA_Achr1P12580_001 | Banana | golgi, plastid, vacuole | 45.14 | 43.82 |
| EES08636 | Sorghum | plastid | 45.37 | 43.65 |
| TraesCSU01G194500.1 | Wheat | golgi | 44.91 | 42.36 |
| OQU83610 | Sorghum | cytosol, golgi, peroxisome, plastid | 46.53 | 41.96 |
| Os11t0546500-00 | Rice | golgi, peroxisome, plastid | 46.53 | 41.61 |
| OQU83607 | Sorghum | plastid | 43.98 | 41.21 |
| Zm00001d052628_P001 | Maize | plasma membrane | 45.6 | 41.13 |
| HORVU4Hr1G089670.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 44.91 | 40.93 |
| TraesCSU01G035200.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 44.91 | 40.93 |
| Zm00001d052627_P001 | Maize | plastid | 43.29 | 40.83 |
| TraesCS6B01G078800.1 | Wheat | plastid | 44.68 | 40.8 |
| TraesCS4B01G391200.1 | Wheat | endoplasmic reticulum | 44.91 | 40.5 |
| HORVU0Hr1G025530.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 19.91 | 34.82 |
| AT5G07720.1 | Thale cress | cytosol, plastid | 36.11 | 34.14 |
| AT1G74380.1 | Thale cress | plastid | 35.19 | 33.26 |
| AT3G62720.1 | Thale cress | mitochondrion | 34.26 | 32.17 |
| AT4G02500.1 | Thale cress | mitochondrion | 34.03 | 31.89 |
| AT1G18690.4 | Thale cress | golgi, plastid | 34.72 | 29.24 |
Protein Annotations
| MapMan:21.2.3.1.3 | Gene3D:3.90.550.10 | EntrezGene:829924 | UniProt:A0A178UWN7 | ProteinID:AEE86828.1 | ArrayExpress:AT4G37690 |
| EnsemblPlantsGene:AT4G37690 | RefSeq:AT4G37690 | TAIR:AT4G37690 | RefSeq:AT4G37690-TAIR-G | EnsemblPlants:AT4G37690.1 | TAIR:AT4G37690.1 |
| Unigene:At.75300 | EMBL:BT015600 | EMBL:BT026516 | ProteinID:CAB38308.1 | ProteinID:CAB80434.1 | GO:GO:0000139 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008378 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010192 | GO:GO:0010392 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0051070 | InterPro:Glyco_trans_34 | InterPro:IPR029044 |
| EMBL:KJ138718 | RefSeq:NP_680773.1 | InterPro:Nucleotide-diphossugar_trans | ProteinID:OAO97121.1 | PFAM:PF05637 | PO:PO:0000293 |
| PANTHER:PTHR31311 | PANTHER:PTHR31311:SF3 | UniProt:Q9SZG1 | TMHMM:TMhelix | UniParc:UPI00000A54B3 | : |
Description
GT6Glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG1]
Coordinates
chr4:+:17707894..17709847
Molecular Weight (calculated)
50297.5 Da
IEP (calculated)
7.053
GRAVY (calculated)
-0.527
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.