Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G194500.1 | Wheat | golgi | 89.64 | 92.58 |
| TraesCS4B01G391200.1 | Wheat | endoplasmic reticulum | 92.81 | 91.65 |
| HORVU4Hr1G089670.1 | Barley | endoplasmic reticulum, golgi, peroxisome, plastid | 90.06 | 89.87 |
| Zm00001d052625_P001 | Maize | plastid | 65.96 | 70.75 |
| EES08636 | Sorghum | plastid | 64.06 | 67.48 |
| OQU83610 | Sorghum | cytosol, golgi, peroxisome, plastid | 67.23 | 66.39 |
| Zm00001d052628_P001 | Maize | plasma membrane | 67.02 | 66.18 |
| Os11t0546500-00 | Rice | golgi, peroxisome, plastid | 66.81 | 65.42 |
| Zm00001d052627_P001 | Maize | plastid | 57.72 | 59.61 |
| OQU83607 | Sorghum | plastid | 57.51 | 59.0 |
| TraesCS6B01G315100.1 | Wheat | golgi, plasma membrane | 52.43 | 58.49 |
| GSMUA_Achr3P30030_001 | Banana | golgi | 46.09 | 54.91 |
| PGSC0003DMT400023470 | Potato | endoplasmic reticulum | 30.66 | 53.7 |
| GSMUA_Achr3P30020_001 | Banana | cytosol, golgi, plastid | 47.99 | 51.13 |
| AT4G38310.1 | Thale cress | nucleus | 12.69 | 50.0 |
| Solyc03g043920.2.1 | Tomato | golgi | 41.86 | 47.83 |
| PGSC0003DMT400055223 | Potato | golgi | 44.19 | 47.5 |
| KRH77153 | Soybean | golgi, nucleus, peroxisome, plastid | 44.82 | 47.22 |
| KRH28334 | Soybean | plastid | 44.82 | 46.9 |
| VIT_00s0322g00030.t01 | Wine grape | mitochondrion | 32.77 | 45.19 |
| CDY49440 | Canola | golgi | 42.71 | 45.09 |
| Bra039938.1-P | Field mustard | golgi, plastid | 42.71 | 45.09 |
| CDX76887 | Canola | golgi, plastid | 42.49 | 44.87 |
| AT4G37690.1 | Thale cress | golgi | 40.8 | 44.68 |
| AT2G22900.1 | Thale cress | plastid | 42.28 | 44.54 |
| Bra017847.1-P | Field mustard | golgi | 41.01 | 44.29 |
| CDY29577 | Canola | golgi | 40.8 | 44.06 |
| CDX72649 | Canola | golgi | 40.8 | 44.06 |
| TraesCS7B01G352300.1 | Wheat | golgi | 34.04 | 37.1 |
| TraesCS4B01G184600.1 | Wheat | endoplasmic reticulum, golgi, peroxisome | 34.25 | 36.24 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 32.98 | 35.06 |
| TraesCS4B01G188100.1 | Wheat | golgi, mitochondrion | 32.56 | 34.15 |
| TraesCS1B01G115300.1 | Wheat | golgi, mitochondrion | 32.56 | 32.98 |
| TraesCS6B01G221000.1 | Wheat | plastid | 32.98 | 32.64 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G078800.1 | EnsemblPlantsGene:TraesCS6B01G078800 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | InterPro:Glyco_trans_34 | InterPro:IPR029044 |
| InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF10 | PFAM:PF05637 | SEG:seg | TMHMM:TMhelix |
| MapMan:21.2.3.1.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6B:+:55336184..55337847
Molecular Weight (calculated)
52292.0 Da
IEP (calculated)
8.741
GRAVY (calculated)
-0.352
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MASETAPFCV TGTAGKGGAS APRPHGRVVL AARIHDTLVF AAGAVAAVLV LLCFSSLLAP APLPNLVAGP SLPFPTSFPQ PQQENDDGNE ESLYARVAAA
101: PRTFYDDAKL SYAVDGRRVT GWDAKRAEWL RLHYPRGLRA RRGPGERVVM LSGSQSYPCA GDGGDHMLLR FLKNKVDYSR LHGMELLYNT ALLQPDMVAY
201: WAKIPVVRAA MLAHPEAEWV WWLDADAVIT DMDFSPPLAT RYKDYNLVVH GWDREVYEAR SWVGLNAGVF LIRNCQWSLD FMDAWASMGP ASPQYSQWGK
301: TLKATLSDKP DAESDDQSAL AYLLLKNRNK WGARTYLENE YYFQGYWAEI VDKLDGVAAR YRAAERRFGP ALRRRHAEGD HALYAAARNA ALRKKGGGVP
401: GPDGGGQKAS AWRRPFVTHF TGCNPCGGRP NEIYSNESCA EGMRRALNLA DDQVLRAYGF RHAGPLKDDV RPL
101: PRTFYDDAKL SYAVDGRRVT GWDAKRAEWL RLHYPRGLRA RRGPGERVVM LSGSQSYPCA GDGGDHMLLR FLKNKVDYSR LHGMELLYNT ALLQPDMVAY
201: WAKIPVVRAA MLAHPEAEWV WWLDADAVIT DMDFSPPLAT RYKDYNLVVH GWDREVYEAR SWVGLNAGVF LIRNCQWSLD FMDAWASMGP ASPQYSQWGK
301: TLKATLSDKP DAESDDQSAL AYLLLKNRNK WGARTYLENE YYFQGYWAEI VDKLDGVAAR YRAAERRFGP ALRRRHAEGD HALYAAARNA ALRKKGGGVP
401: GPDGGGQKAS AWRRPFVTHF TGCNPCGGRP NEIYSNESCA EGMRRALNLA DDQVLRAYGF RHAGPLKDDV RPL
001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
Arabidopsis Description
XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
SUBAcon: [golgi,plastid]
SUBAcon: [golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.