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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • plastid 1
  • golgi 2
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:cytosol, golgi, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:golgi
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1B01G115300.1 golgi, golgi
TraesCS4A01G116100.2 golgi, golgi
TraesCS4B01G188100.1 golgi, golgi
TraesCS4D01G189500.1 golgi, golgi
TraesCS5A01G129800.1 golgi, golgi
TraesCS5B01G128600.1 golgi, golgi
TraesCS5D01G137300.1 golgi, golgi
TraesCS6A01G196600.1 golgi, golgi
TraesCS6B01G221000.1 golgi, golgi
TraesCS6D01G181200.1 golgi, golgi

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G62720.1 TraesCS5A01G129800.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS5B01G128600.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS5D01G137300.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS6A01G196600.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS6B01G221000.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS6D01G181200.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS1B01G115300.1 AT4G02500.1 22665445
AT3G62720.1 TraesCS4A01G116100.2 AT4G02500.1 22665445
AT3G62720.1 TraesCS4B01G188100.1 AT4G02500.1 22665445
AT3G62720.1 TraesCS4D01G189500.1 AT4G02500.1 22665445
AT4G02500.1 TraesCS5A01G129800.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS5B01G128600.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS5D01G137300.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS6A01G196600.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS6B01G221000.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS6D01G181200.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS1B01G115300.1 AT4G02500.1 22665445
AT4G02500.1 TraesCS4A01G116100.2 AT4G02500.1 22665445
AT4G02500.1 TraesCS4B01G188100.1 AT4G02500.1 22665445
AT4G02500.1 TraesCS4D01G189500.1 AT4G02500.1 22665445
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G188100.1 Wheat golgi, mitochondrion 95.72 99.11
HORVU4Hr1G054910.1 Barley golgi, mitochondrion 93.79 96.9
Os03t0300000-01 Rice cytosol 67.88 91.09
Zm00001d026023_P001 Maize endoplasmic reticulum, golgi 50.75 89.43
EER92398 Sorghum golgi 83.3 87.22
Zm00001d028811_P001 Maize plasma membrane 83.3 87.02
Zm00001d025851_P001 Maize cytosol 67.45 87.02
Zm00001d047694_P001 Maize golgi 83.3 86.83
Zm00001d051264_P001 Maize mitochondrion, plastid 72.16 84.89
Zm00001d035801_P001 Maize mitochondrion, nucleus, plastid 33.19 80.31
GSMUA_Achr1P24760_001 Banana mitochondrion 71.09 76.85
GSMUA_Achr8P22410_001 Banana golgi, mitochondrion 68.95 75.06
CDY22055 Canola mitochondrion 70.45 73.27
CDY11443 Canola cytosol 9.21 72.88
CDX90935 Canola mitochondrion 70.02 72.83
CDY18017 Canola mitochondrion 51.61 71.94
Bra036262.1-P Field mustard mitochondrion 71.09 71.86
VIT_07s0005g00150.t01 Wine grape mitochondrion 69.38 71.68
KRH37112 Soybean golgi, mitochondrion 68.74 71.33
Bra000877.1-P Field mustard mitochondrion 70.66 71.27
Bra018545.1-P Field mustard mitochondrion 70.24 71.0
AT4G02500.1 Thale cress mitochondrion 70.02 70.93
CDY50378 Canola cytosol 70.24 69.94
KRG96428 Soybean mitochondrion 68.09 69.89
Bra007696.1-P Field mustard mitochondrion 67.02 68.64
AT3G62720.1 Thale cress mitochondrion 67.24 68.26
VIT_05s0020g01530.t01 Wine grape mitochondrion 68.09 68.24
CDY70090 Canola mitochondrion 51.39 67.8
CDX76657 Canola mitochondrion 27.84 67.71
PGSC0003DMT400058812 Potato mitochondrion 67.24 67.67
CDX93965 Canola mitochondrion 65.95 67.25
Bra014396.1-P Field mustard mitochondrion 65.74 66.88
CDY70418 Canola golgi, mitochondrion 65.74 66.74
CDX97271 Canola mitochondrion 38.12 66.17
KRH12052 Soybean mitochondrion 35.76 62.55
CDY65940 Canola mitochondrion 35.55 62.41
KRH68171 Soybean golgi, mitochondrion 29.55 57.26
CDY11442 Canola cytosol, extracellular, mitochondrion, plastid 10.06 55.29
Solyc01g067930.2.1 Tomato mitochondrion 22.91 50.95
TraesCS5B01G128600.1 Wheat golgi, mitochondrion 47.32 49.66
TraesCS6B01G221000.1 Wheat plastid 50.75 49.58
CDY11441 Canola mitochondrion 19.91 49.21
TraesCS7B01G352300.1 Wheat golgi 45.4 48.85
TraesCS4B01G184600.1 Wheat endoplasmic reticulum, golgi, peroxisome 45.4 47.43
TraesCS6B01G315100.1 Wheat golgi, plasma membrane 35.55 39.15
TraesCS6B01G078800.1 Wheat plastid 32.98 32.56
TraesCS4B01G391200.1 Wheat endoplasmic reticulum 33.19 32.36
Protein Annotations
EnsemblPlants:TraesCS1B01G115300.1EnsemblPlantsGene:TraesCS1B01G115300Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_34InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPANTHER:PTHR31311PANTHER:PTHR31311:SF6PFAM:PF05637SEG:segTMHMM:TMhelix
MapMan:21.2.1.1.2:::::
Description
No Description!
Coordinates
chr1B:-:135825687..135827090
Molecular Weight (calculated)
54099.9 Da
IEP (calculated)
7.829
GRAVY (calculated)
-0.487
Length
467 amino acids
Sequence
(BLAST)
001: MWVAERVLGE RRMREIQRFT RNAKLTVVCL MLTILVLRGT VGAGKFGTPQ QDLTELRHRF ISHPQRALSE HHDARSKASD AQAQATQAAG KAAARDDEPE
101: PQPRSLRDPP YTLGPKISDW DEQRAAWNRR HPETPPFLND VKPRVMLVTG SSPKPCENPV GDHYLLKSIK NKIDYCRIHG LEIFYNMALL DAELAGFWAK
201: LPLLRALLLA HPEVEFFWWM DSDAMFTDMA FELPWERYGP YNFILHGWDE MVYDDKNWIG LNTGSFLLRN CQWSLDYLDT WAPMGPKGPV RIEAGKVLTK
301: YLKDRPVFEA DDQSAMVYIL ATQREKWGNK VYLENGYYLH GYWGILVDRY EEMLENYQPG LGDHRWPLVT HFVGCKPCSK FGDYPVERCL KQMDRAFNFG
401: DNQVLHMYGF EHKSLASRRI KRVRNETSDP LDMKDDYGLL HPAFKALKTT TPSVFLNISL CKNFTMN
Best Arabidopsis Sequence Match ( AT4G02500.1 )
(BLAST)
001: MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V
Arabidopsis Description
XXT2Xyloglucan 6-xylosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:O22775]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.