Factsheet for Os03t0300000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0529600-01	golgi, golgi
Os03t0300000-01	golgi, golgi
Os12t0149300-01	golgi, golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G62720.1	Os02t0529600-01	AT1G74380.1	22665445
AT3G62720.1	Os12t0149300-01	AT1G74380.1	22665445
AT3G62720.1	Os03t0300000-01	AT4G02500.1	22665445
AT4G02500.1	Os02t0529600-01	AT1G74380.1	22665445
AT4G02500.1	Os12t0149300-01	AT1G74380.1	22665445
AT4G02500.1	Os03t0300000-01	AT4G02500.1	22665445

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	70.11	92.08
Zm00001d025851_P001	Maize	cytosol	86.49	83.15
Zm00001d051264_P001	Maize	mitochondrion, plastid	91.67	80.35
CDY11443	Canola	cytosol	13.22	77.97
EER92398	Sorghum	golgi	93.97	73.32
Zm00001d028811_P001	Maize	plasma membrane	93.68	72.93
Zm00001d047694_P001	Maize	golgi	93.68	72.77
HORVU4Hr1G054910.1	Barley	golgi, mitochondrion	91.38	70.35
TraesCS4D01G189500.1	Wheat	golgi, mitochondrion	91.09	70.29
TraesCS4B01G188100.1	Wheat	golgi, mitochondrion	91.09	70.29
GSMUA_Achr8P22410_001	Banana	golgi, mitochondrion	86.21	69.93
TraesCS4A01G116100.2	Wheat	golgi, mitochondrion	90.8	69.91
GSMUA_Achr1P24760_001	Banana	mitochondrion	86.78	69.91
TraesCS1B01G115300.1	Wheat	golgi, mitochondrion	91.09	67.88
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	37.36	67.36
CDX76657	Canola	mitochondrion	36.49	66.15
CDX90935	Canola	mitochondrion	84.48	65.48
KRH37112	Soybean	golgi, mitochondrion	83.91	64.89
CDY22055	Canola	mitochondrion	83.62	64.81
AT4G02500.1	Thale cress	mitochondrion	84.48	63.77
VIT_07s0005g00150.t01	Wine grape	mitochondrion	82.76	63.72
Bra000877.1-P	Field mustard	mitochondrion	84.48	63.5
Bra036262.1-P	Field mustard	mitochondrion	84.2	63.42
KRG96428	Soybean	mitochondrion	82.76	63.3
Bra018545.1-P	Field mustard	mitochondrion	83.91	63.2
PGSC0003DMT400058812	Potato	mitochondrion	83.05	62.28
Bra007696.1-P	Field mustard	mitochondrion	81.32	62.06
CDY50378	Canola	cytosol	83.62	62.05
AT3G62720.1	Thale cress	mitochondrion	81.9	61.96
VIT_05s0020g01530.t01	Wine grape	mitochondrion	82.47	61.59
CDX93965	Canola	mitochondrion	80.46	61.14
Bra014396.1-P	Field mustard	mitochondrion	80.46	61.0
CDY18017	Canola	mitochondrion	58.33	60.6
CDY70418	Canola	golgi, mitochondrion	79.89	60.43
CDY70090	Canola	mitochondrion	57.47	56.5
CDY11442	Canola	cytosol, extracellular, mitochondrion, plastid	13.51	55.29
CDX97271	Canola	mitochondrion	39.37	50.93
KRH12052	Soybean	mitochondrion	36.21	47.19
CDY65940	Canola	mitochondrion	35.92	46.99
Os02t0529600-01	Rice	golgi, peroxisome, plastid	62.93	45.62
Os03t0306100-00	Rice	golgi	58.33	45.21
Os12t0149300-01	Rice	golgi	59.77	44.64
Os03t0305800-02	Rice	golgi	59.48	42.86
KRH68171	Soybean	golgi, mitochondrion	27.3	39.42
Os02t0723200-01	Rice	mitochondrion	44.25	34.45
Solyc01g067930.2.1	Tomato	mitochondrion	19.83	32.86
Os11t0546500-00	Rice	golgi, peroxisome, plastid	43.68	31.47
CDY11441	Canola	mitochondrion	16.38	30.16

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	UniProt:A0A0P0VWF0	ProteinID:BAS83756.1	ProteinID:BAS83757.1	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0007275	GO:GO:0008150	GO:GO:0009653	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016049	GO:GO:0016740	GO:GO:0016757	GO:GO:0030154	GO:GO:0033843
GO:GO:0040007	GO:GO:0048767	InterPro:Glyco_trans_34	InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	EnsemblPlantsGene:Os03g0300000
EnsemblPlants:Os03t0300000-01	PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF6	UniParc:UPI0000E12031	SEG:seg

Description

xyloglucan 6-xylosytransferase 1, short root hair2Similar to Xyloglucan 6-xylosyltransferase (EC 2.4.2.39) (AtXT1). (Os03t0300000-01);Similar to glycosyltransferase 5. (Os03t0300000-02)

Coordinates

chr3:-:10547471..10548714

Molecular Weight (calculated)

40549.7 Da

IEP (calculated)

6.647

GRAVY (calculated)

-0.463

Length

348 amino acids

Sequence
(BLAST)

001: TLRDPPYTLG PKISDWDEQR AAWHRRHPET PPFVNDVKPR VLLVTGSSPK PCENPVGDHY LLKSIKNKMD YCRVHGLEIF YNMALLDAEM AGFWAKLPLL
101: RALLLAHPEI EFLWWMDSDA MFSDMAFELP WERYGPYNLI MHGWDEMVYD DKNWIGLNTG SFLLRNCQWS LDFLDTWAPM GPKGPVRIEA GKVLTKYLKD
201: RPVFEADDQS AMVYILATER EKWGDKVYLE NGYYLHGYWG ILVDRYEEML ENYHPGLGDH RWPLVTHFVG CKPCGKFGDY PVERCLKQME RAFNFGDNQI
301: LQMYGFTHKS LGSRKVKRIR NETSNPLDVK DELGLLHPAF KAMKTTST

Best Arabidopsis Sequence Match ( AT4G02500.1 )
(BLAST)

001: MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V

Arabidopsis Description

XXT2Xyloglucan 6-xylosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:O22775]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.