Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 2
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
23508561
mitochondrion: 27297264 plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016687_P001 | golgi, golgi |
| Zm00001d023398_P001 | golgi, golgi |
| Zm00001d023399_P001 | golgi, golgi |
| Zm00001d023417_P001 | golgi, golgi |
| Zm00001d023418_P001 | golgi, golgi |
| Zm00001d025851_P001 | golgi, golgi |
| Zm00001d026023_P001 | golgi, golgi |
| Zm00001d028811_P001 | golgi, golgi |
| Zm00001d035801_P001 | golgi, golgi |
| Zm00001d043041_P001 | golgi, golgi |
| Zm00001d047694_P001 | golgi, golgi |
| Zm00001d051264_P001 | golgi, golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d047694_P001 | Maize | golgi | 98.66 | 98.44 |
| EER92398 | Sorghum | golgi | 98.21 | 98.43 |
| Zm00001d025851_P001 | Maize | cytosol | 79.64 | 98.34 |
| Zm00001d026023_P001 | Maize | endoplasmic reticulum, golgi | 57.94 | 97.74 |
| Zm00001d051264_P001 | Maize | mitochondrion, plastid | 85.01 | 95.72 |
| Os03t0300000-01 | Rice | cytosol | 72.93 | 93.68 |
| Zm00001d035801_P001 | Maize | mitochondrion, nucleus, plastid | 39.6 | 91.71 |
| HORVU4Hr1G054910.1 | Barley | golgi, mitochondrion | 87.7 | 86.73 |
| TraesCS4A01G116100.2 | Wheat | golgi, mitochondrion | 87.25 | 86.28 |
| TraesCS4D01G189500.1 | Wheat | golgi, mitochondrion | 87.02 | 86.25 |
| TraesCS4B01G188100.1 | Wheat | golgi, mitochondrion | 86.8 | 86.03 |
| TraesCS1B01G115300.1 | Wheat | golgi, mitochondrion | 87.02 | 83.3 |
| CDY11443 | Canola | cytosol | 10.74 | 81.36 |
| GSMUA_Achr1P24760_001 | Banana | mitochondrion | 78.52 | 81.25 |
| GSMUA_Achr8P22410_001 | Banana | golgi, mitochondrion | 74.05 | 77.16 |
| CDY22055 | Canola | mitochondrion | 76.06 | 75.72 |
| CDX90935 | Canola | mitochondrion | 75.62 | 75.28 |
| CDY18017 | Canola | mitochondrion | 55.93 | 74.63 |
| VIT_07s0005g00150.t01 | Wine grape | mitochondrion | 75.39 | 74.56 |
| Bra036262.1-P | Field mustard | mitochondrion | 76.73 | 74.24 |
| KRH37112 | Soybean | golgi, mitochondrion | 74.5 | 74.0 |
| AT4G02500.1 | Thale cress | mitochondrion | 76.29 | 73.97 |
| Bra000877.1-P | Field mustard | mitochondrion | 76.29 | 73.65 |
| Bra018545.1-P | Field mustard | mitochondrion | 75.62 | 73.16 |
| CDY50378 | Canola | cytosol | 76.51 | 72.92 |
| KRG96428 | Soybean | mitochondrion | 73.83 | 72.53 |
| VIT_05s0020g01530.t01 | Wine grape | mitochondrion | 74.72 | 71.67 |
| PGSC0003DMT400058812 | Potato | mitochondrion | 73.6 | 70.91 |
| Bra007696.1-P | Field mustard | mitochondrion | 72.26 | 70.83 |
| AT3G62720.1 | Thale cress | mitochondrion | 72.71 | 70.65 |
| CDX76657 | Canola | mitochondrion | 30.2 | 70.31 |
| CDX93965 | Canola | mitochondrion | 71.36 | 69.65 |
| CDY70090 | Canola | mitochondrion | 55.03 | 69.49 |
| Bra014396.1-P | Field mustard | mitochondrion | 70.92 | 69.06 |
| CDY70418 | Canola | golgi, mitochondrion | 70.92 | 68.91 |
| CDX97271 | Canola | mitochondrion | 40.72 | 67.66 |
| CDY65940 | Canola | mitochondrion | 38.26 | 64.29 |
| KRH12052 | Soybean | mitochondrion | 38.26 | 64.04 |
| KRH68171 | Soybean | golgi, mitochondrion | 30.65 | 56.85 |
| CDY11442 | Canola | cytosol, extracellular, mitochondrion, plastid | 10.51 | 55.29 |
| Zm00001d047647_P001 | Maize | mitochondrion | 44.97 | 54.18 |
| Solyc01g067930.2.1 | Tomato | mitochondrion | 24.38 | 51.9 |
| CDY11441 | Canola | mitochondrion | 21.25 | 50.26 |
| Zm00001d016687_P001 | Maize | plasma membrane | 52.57 | 49.16 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 50.11 | 49.12 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 49.89 | 48.9 |
| Zm00001d039763_P001 | Maize | golgi, mitochondrion | 48.32 | 48.11 |
| Zm00001d028874_P001 | Maize | golgi | 44.97 | 44.18 |
| Zm00001d023398_P001 | Maize | mitochondrion | 43.62 | 38.01 |
| Zm00001d052625_P001 | Maize | plastid | 36.47 | 36.96 |
| Zm00001d051681_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 36.69 | 36.94 |
| Zm00001d047654_P001 | Maize | golgi, plasma membrane | 17.23 | 36.84 |
| Zm00001d047657_P001 | Maize | mitochondrion | 14.54 | 36.52 |
| Zm00001d047648_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 22.37 | 36.1 |
| Zm00001d043041_P001 | Maize | nucleus | 23.27 | 35.25 |
| Zm00001d052628_P001 | Maize | plasma membrane | 35.79 | 33.4 |
| Zm00001d052627_P001 | Maize | plastid | 34.0 | 33.19 |
| Zm00001d023418_P001 | Maize | nucleus | 44.3 | 19.2 |
Protein Annotations
| EntrezGene:100285084 | MapMan:21.2.1.1.2 | Gene3D:3.90.550.10 | EMBL:BT064349 | UniProt:C0P7T0 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 |
| InterPro:Glyco_trans_34 | InterPro:IPR029044 | InterPro:Nucleotide-diphossugar_trans | ProteinID:ONL97076.1 | PFAM:PF05637 | PANTHER:PTHR31311 |
| PANTHER:PTHR31311:SF6 | TMHMM:TMhelix | UniParc:UPI0001948B5C | EnsemblPlantsGene:Zm00001d028811 | EnsemblPlants:Zm00001d028811_P001 | EnsemblPlants:Zm00001d028811_T001 |
| SEG:seg | : | : | : | : | : |
Description
Xyloglucan 6-xylosyltransferase 2
Coordinates
chr1:-:47152651..47153994
Molecular Weight (calculated)
51600.9 Da
IEP (calculated)
8.279
GRAVY (calculated)
-0.515
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MWAERVVGER RMRQIQRFAR NAKLTVVCLL LTVVVLRGTV GAGRFGTPQQ DLIELRQHFV SHPHRALAEH HDARSRASTT TTSSSSSSAR RDDDPDPPPR
101: TLRDPPYTLG PKISDWDEQR AAWHRRHPET PPFLNDIKPR VLLVTGSSPK PCENPVGDHY LLKSIKNKMD YCRVHGIEVF YNMALLDAEM AGFWAKLPLM
201: RALLLAHPEV EFLWWMDSDA MFTDMAFELP WERYGPYNLI MHGWDEMVYD DKNWIGLNTG SFLLRNCQWS LDMLDTWAPM GPKGPVRIEA GKVLTKSLKD
301: RPVFEADDQS AMVYILATQR EKWGDKVYLE NGYYLHGYWG ILVDRYEEML ENYKPGLGDH RWPLVTHFVG CKPCGKFGDY PVERCLKNMD RAFNFGDNQI
401: LQMYGFTHKS LASRRVKRTR NETSNPLETK DELGLLHPAF KAVKTST
101: TLRDPPYTLG PKISDWDEQR AAWHRRHPET PPFLNDIKPR VLLVTGSSPK PCENPVGDHY LLKSIKNKMD YCRVHGIEVF YNMALLDAEM AGFWAKLPLM
201: RALLLAHPEV EFLWWMDSDA MFTDMAFELP WERYGPYNLI MHGWDEMVYD DKNWIGLNTG SFLLRNCQWS LDMLDTWAPM GPKGPVRIEA GKVLTKSLKD
301: RPVFEADDQS AMVYILATQR EKWGDKVYLE NGYYLHGYWG ILVDRYEEML ENYKPGLGDH RWPLVTHFVG CKPCGKFGDY PVERCLKNMD RAFNFGDNQI
401: LQMYGFTHKS LASRRVKRTR NETSNPLETK DELGLLHPAF KAVKTST
001: MIERCLGAYR CRRIQRALRQ LKVTILCLLL TVVVLRSTIG AGKFGTPEQD LDEIRQHFHA RKRGEPHRVL EEIQTGGDSS SGDGGGNSGG SNNYETFDIN
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V
101: KIFVDEGEEE KPDPNKPYTL GPKISDWDEQ RSDWLAKNPS FPNFIGPNKP RVLLVTGSAP KPCENPVGDH YLLKSIKNKI DYCRLHGIEI FYNMALLDAE
201: MAGFWAKLPL IRKLLLSHPE IEFLWWMDSD AMFTDMAFEL PWERYKDYNL VMHGWNEMVY DQKNWIGLNT GSFLLRNNQW ALDLLDTWAP MGPKGKIREE
301: AGKVLTRELK DRPVFEADDQ SAMVYLLATQ RDAWGNKVYL ESGYYLHGYW GILVDRYEEM IENYHPGLGD HRWPLVTHFV GCKPCGKFGD YPVERCLKQM
401: DRAFNFGDNQ ILQIYGFTHK SLASRKVKRV RNETSNPLEM KDELGLLHPA FKAVKVQTNQ V
Arabidopsis Description
XXT2Xyloglucan 6-xylosyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:O22775]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.