Factsheet for Zm00001d047657_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047654_P001	Maize	golgi, plasma membrane	84.27	71.77
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	70.22	45.13
Zm00001d028874_P001	Maize	golgi	70.79	27.69
EER92377	Sorghum	golgi	69.1	27.58
TraesCS4B01G184600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	55.06	21.92
TraesCS4A01G120100.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	53.93	21.82
HORVU4Hr1G054120.3	Barley	golgi, plasma membrane	56.74	21.81
TraesCS4D01G185900.1	Wheat	endoplasmic reticulum, golgi, peroxisome	54.49	21.7
TraesCS7D01G441500.1	Wheat	golgi	51.12	21.31
TraesCS7B01G352300.1	Wheat	golgi	51.12	20.97
TraesCS7A01G452400.1	Wheat	golgi	51.12	20.92
HORVU7Hr1G102070.1	Barley	golgi	52.25	20.9
Zm00001d047647_P001	Maize	mitochondrion	42.7	20.49
Os03t0305800-02	Rice	golgi	52.81	19.46
Zm00001d039763_P001	Maize	golgi, mitochondrion	46.07	18.26
Zm00001d043041_P001	Maize	nucleus	27.53	16.61
Zm00001d051264_P001	Maize	mitochondrion, plastid	33.71	15.11
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	21.91	14.72
Zm00001d028811_P001	Maize	plasma membrane	36.52	14.54
Zm00001d047694_P001	Maize	golgi	36.52	14.51
Zm00001d023417_P001	Maize	golgi, mitochondrion	35.39	13.82
Zm00001d023399_P001	Maize	golgi, mitochondrion	35.39	13.82
Zm00001d016687_P001	Maize	plasma membrane	34.83	12.97
Zm00001d052625_P001	Maize	plastid	29.21	11.79
Zm00001d025851_P001	Maize	cytosol	23.6	11.6
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	28.09	11.26
Zm00001d052628_P001	Maize	plasma membrane	29.78	11.06
Zm00001d052627_P001	Maize	plastid	28.09	10.92
Zm00001d023398_P001	Maize	mitochondrion	30.34	10.53
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	11.24	10.36
Zm00001d023418_P001	Maize	nucleus	31.46	5.43

Protein Annotations

EnsemblPlants:Zm00001d047657_P001	EnsemblPlants:Zm00001d047657_T001	EnsemblPlantsGene:Zm00001d047657	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF7	PFAM:PF05637	ProteinID:AQL07201.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0008457CD6	UniProt:A0A1D6PC47	MapMan:35.1	:

Description

Xyloglucan 6-xylosyltransferase 2

Coordinates

chr9:+:138286674..138287411

Molecular Weight (calculated)

20364.8 Da

IEP (calculated)

8.243

GRAVY (calculated)

0.090

Length

178 amino acids

Sequence
(BLAST)

001: MMKRPVAADR RARQHRLLPL LVFPAFFLFI IAPCALFLFR TSASSMTAAT LYPSHLEMSR CQHSQCHCHR ATTVASTTAF GSSDPNGKHM LLRAFKNKAD
101: YCRVHGFDIF YSTVLLDAEL SGFWSKLPLL RTLMLVHPET ELLWWVDSDV IFIDMLFEPP WDKYAGHNLV FPGSEEKV

Best Arabidopsis Sequence Match ( AT3G62720.1 )
(BLAST)

001: MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT

Arabidopsis Description

XXT1XXT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VEJ0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.