Factsheet for Zm00001d052627_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83607	Sorghum	plastid	86.03	85.47
Zm00001d052625_P001	Maize	plastid	71.18	73.92
Os11t0546500-00	Rice	golgi, peroxisome, plastid	64.19	60.87
Zm00001d052628_P001	Maize	plasma membrane	62.88	60.13
TraesCSU01G194500.1	Wheat	golgi	58.73	58.73
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	60.26	58.23
TraesCS6B01G078800.1	Wheat	plastid	59.61	57.72
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	60.26	57.62
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	59.61	57.59
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	53.93	55.63
PGSC0003DMT400023470	Potato	endoplasmic reticulum	31.66	53.7
GSMUA_Achr3P30030_001	Banana	golgi	44.98	51.89
AT4G38310.1	Thale cress	nucleus	12.88	49.17
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	46.94	48.42
Solyc03g043920.2.1	Tomato	golgi	43.01	47.58
PGSC0003DMT400055223	Potato	golgi	43.67	45.45
Bra017847.1-P	Field mustard	golgi	42.36	44.29
CDX72649	Canola	golgi	42.14	44.06
CDY29577	Canola	golgi	42.14	44.06
Zm00001d047647_P001	Maize	mitochondrion	35.59	43.94
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	43.01	43.88
KRH28334	Soybean	plastid	43.01	43.58
AT4G37690.1	Thale cress	golgi	40.83	43.29
AT2G22900.1	Thale cress	plastid	42.14	42.98
CDX76887	Canola	golgi, plastid	41.7	42.63
CDY49440	Canola	golgi	41.7	42.63
Bra039938.1-P	Field mustard	golgi, plastid	41.7	42.63
Zm00001d026023_P001	Maize	endoplasmic reticulum, golgi	24.24	41.89
VIT_00s0322g00030.t01	Wine grape	mitochondrion	31.22	41.69
Zm00001d025851_P001	Maize	cytosol	29.04	36.74
Zm00001d051264_P001	Maize	mitochondrion, plastid	31.44	36.27
Zm00001d023399_P001	Maize	golgi, mitochondrion	35.37	35.53
Zm00001d023417_P001	Maize	golgi, mitochondrion	34.93	35.09
Zm00001d039763_P001	Maize	golgi, mitochondrion	34.28	34.97
Zm00001d028811_P001	Maize	plasma membrane	33.19	34.0
Zm00001d047694_P001	Maize	golgi	33.19	33.93
Zm00001d028874_P001	Maize	golgi	33.19	33.41
Zm00001d016687_P001	Maize	plasma membrane	33.19	31.8
Zm00001d035801_P001	Maize	mitochondrion, nucleus, plastid	12.88	30.57
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	18.12	29.96
Zm00001d043041_P001	Maize	nucleus	19.0	29.49
Zm00001d047657_P001	Maize	mitochondrion	10.92	28.09
Zm00001d047654_P001	Maize	golgi, plasma membrane	12.66	27.75
Zm00001d023398_P001	Maize	mitochondrion	29.69	26.51
Zm00001d023418_P001	Maize	nucleus	29.69	13.19

Protein Annotations

EntrezGene:103654389	MapMan:21.2.3.1.3	Gene3D:3.90.550.10	ProteinID:AQK57544.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	UniProt:K7UMG2	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF10
TMHMM:TMhelix	UniParc:UPI000220FD7E	EnsemblPlantsGene:Zm00001d052627	EnsemblPlants:Zm00001d052627_P001	EnsemblPlants:Zm00001d052627_T001	SEG:seg

Description

Glycosyltransferase 6

Coordinates

chr4:+:195242053..195243429

Molecular Weight (calculated)

50691.3 Da

IEP (calculated)

8.942

GRAVY (calculated)

-0.321

Length

458 amino acids

Sequence
(BLAST)

001: MVATSEAAPL RVSASVGSKH HGGAGTRGPA TRRRARDVVV FAAGVAATLL ALVGTASVLD PGGRGGLVAL RVPVPVPGPE DGPRTFYDDP EVSYAVAAGR
101: RLTGWDAKRA EWLRSRGLGR RSAPERVVMV SGSQPEPCPG GAGDHLMLRF LKNKLDYCRL HGIELLYNRE FLHPAMGGYW AKIPIVRAAM LAHPDAEWVW
201: WVDSDAVFTD MDFSLPLAKY GGRNFVVYGW PDKFFVRKSW LGLNAGVFLI RNCQWSLDFM DEWARMGPAY PEDHARWGEV LRATLSDKDS DVACDQSALV
301: YLLLNNWERP GKKTFVETEY FFQGYWKEVV DRLDGVAARY EAVERRSPGL RRRHAEQEHL RYAGARNAAL RGVVPGPAGG GEVGWRRPLI THFVGCQPCS
401: GGRNPMYSRE SCDDGMRHAL GFADDQVLRA YGFRHAAPLN DSVRGLPFDY PAAHARND

Best Arabidopsis Sequence Match ( AT4G37690.1 )
(BLAST)

001: MGKPGGAKTR TAVCLSDGVF FLAGAFMSLT LVWSYFSIFS PSFTSLRHDG KPVQCSGLDM QFDPSEPGFY DDPDLSYSIE KPITKWDEKR NQWFESHPSF
101: KPGSENRIVM VTGSQSSPCK NPIGDHLLLR CFKNKVDYAR IHGHDIFYSN SLLHPKMNSY WAKLPVVKAA MLAHPEAEWI WWVDSDAIFT DMEFKPPLHR
201: YRQHNLVVHG WPNIIYEKQS WTALNAGVFL IRNCQWSMDL IDTWKSMGPV SPDYKKWGPI QRSIFKDKLF PESDDQTALI YLLYKHKELY YPKIYLEAEY
301: YLQGYWIGVF GDFANVTERY LEMEREDDTL RRRHAEKVSE RYGAFREERF LKGEFGGRGS RRRAFITHFT GCQPCSGDHN PSYDGDTCWN EMIRALNFAD
401: NQVMRVYGYV HSDLSKTSPL QPLPFDYPNE AW

Arabidopsis Description

GT6Glycosyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZG1]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.