Factsheet for GSMUA_Achr3P30020_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

nucleus 1
golgi 2
plastid 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	extracellular, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P30030_001	Banana	golgi	71.17	79.6
AT4G38310.1	Thale cress	nucleus	16.22	60.0
EES07343	Sorghum	golgi	57.43	57.56
PGSC0003DMT400023470	Potato	endoplasmic reticulum	34.68	57.04
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	54.28	56.84
HORVU6Hr1G071920.1	Barley	golgi	54.5	56.67
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	56.31	56.31
PGSC0003DMT400055223	Potato	golgi	54.95	55.45
Solyc03g043920.2.1	Tomato	golgi	50.68	54.35
Os02t0723200-01	Rice	mitochondrion	54.28	53.91
TraesCS6D01G266700.1	Wheat	plastid	55.41	53.48
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	53.15	52.56
KRH28334	Soybean	plastid	53.15	52.21
CDY49440	Canola	golgi	52.03	51.56
CDX76887	Canola	golgi, plastid	52.03	51.56
Bra039938.1-P	Field mustard	golgi, plastid	52.03	51.56
VIT_00s0322g00030.t01	Wine grape	mitochondrion	39.41	51.02
AT2G22900.1	Thale cress	plastid	51.58	51.0
Zm00001d052625_P001	Maize	plastid	50.45	50.79
Bra017847.1-P	Field mustard	golgi	50.0	50.68
CDY29577	Canola	golgi	49.77	50.46
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	50.45	50.34
EES08636	Sorghum	plastid	50.9	50.33
CDX72649	Canola	golgi	49.32	50.0
TraesCSU01G194500.1	Wheat	golgi	51.35	49.78
AT4G37690.1	Thale cress	golgi	48.42	49.77
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	53.38	49.48
Zm00001d052628_P001	Maize	plasma membrane	52.7	48.85
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	52.03	48.23
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	51.35	48.1
TraesCS6B01G078800.1	Wheat	plastid	51.13	47.99
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	51.13	47.89
Os11t0546500-00	Rice	golgi, peroxisome, plastid	52.03	47.83
OQU83607	Sorghum	plastid	49.1	47.29
Zm00001d052627_P001	Maize	plastid	48.42	46.94
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	21.85	39.27
GSMUA_Achr8P22410_001	Banana	golgi, mitochondrion	37.61	38.93
GSMUA_Achr1P24760_001	Banana	mitochondrion	37.84	38.89
GSMUA_Achr10P...	Banana	cytosol	37.39	38.25
GSMUA_Achr3P22760_001	Banana	cytosol	38.06	36.82
GSMUA_Achr11P...	Banana	cytosol	38.51	33.66
GSMUA_Achr10P...	Banana	plastid	37.61	33.13

Protein Annotations

EnsemblPlants:GSMUA_Achr3P30020_001	EnsemblPlants:GSMUA_Achr3T30020_001	EnsemblPlantsGene:GSMUA_Achr3G30020_001	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF3	PFAM:PF05637	SEG:seg
TMHMM:TMhelix	UniParc:UPI000295D80A	UniProt:M0SJ18	MapMan:21.2.3.1.3	:	:

Description

Galactomannan galactosyltransferase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G30020_001]

Coordinates

chr3:-:28905378..28908055

Molecular Weight (calculated)

50440.5 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.351

Length

444 amino acids

Sequence
(BLAST)

001: MDHMPHPRFE HRADMTSLFL RHANGMPGTE PSSPSSARTS KGLMTRRSSK PSLFSDGLVF AGGAGVALLV FWVVSTFFSA VTVVDPSAFP FSVSSSAAFP
101: DLHDRDPPGA TFYDDPSVSY TIDRPLTGWD AKRRDWLRLH PAFGGYGRER VLMVTGSQPG PCRNPVGDHL LLRFFKNKVD YCRRHGIELF YNTALLHPAM
201: NTFWAKLPMV RAAMLAHPEA DWVWWVDSDA AFTDMDFELP LDRYRDHNLV VHGWPRLVYE ARSWVSLNAG VFLIRNCQWS LDFMAVWAAT GPMSPDYDRW
301: GQLQKAEFKD KLFNESDDQS ALVYLLLKHK DQWGDKIFLE SDYYFEGYWV EIVGRLENMT AKYAADGAVS GPNGWRRPFM THFTGCQPCS GDHNKMYSGE
401: SCWEGMQRAL HFADDQVLRD YGFRHADPLS GDVEPLPFDY PSAA

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.