Factsheet for Solyc03g043920.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400023470	Potato	endoplasmic reticulum	61.84	94.81
AT4G38310.1	Thale cress	nucleus	19.32	66.67
KRH77153	Soybean	golgi, nucleus, peroxisome, plastid	62.08	57.24
KRH28334	Soybean	plastid	61.35	56.19
AT4G37690.1	Thale cress	golgi	58.21	55.79
VIT_00s0322g00030.t01	Wine grape	mitochondrion	45.65	55.1
CDY29577	Canola	golgi	57.97	54.79
Bra017847.1-P	Field mustard	golgi	57.97	54.79
CDX72649	Canola	golgi	57.25	54.11
AT2G22900.1	Thale cress	plastid	58.45	53.9
CDX76887	Canola	golgi, plastid	58.21	53.79
CDY49440	Canola	golgi	57.97	53.57
Bra039938.1-P	Field mustard	golgi, plastid	57.97	53.57
Solyc02g092210.1.1	Tomato	golgi, mitochondrion	56.76	53.05
GSMUA_Achr3P30030_001	Banana	golgi	49.52	51.64
GSMUA_Achr3P30020_001	Banana	cytosol, golgi, plastid	54.35	50.68
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	51.69	50.47
HORVU6Hr1G071920.1	Barley	golgi	50.72	49.18
EES07343	Sorghum	golgi	51.93	48.53
Zm00001d051681_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	51.93	48.42
Os02t0723200-01	Rice	mitochondrion	50.48	46.76
Zm00001d052625_P001	Maize	plastid	49.52	46.49
EES08636	Sorghum	plastid	50.0	46.1
TraesCS6D01G266700.1	Wheat	plastid	50.72	45.65
GSMUA_Achr1P12580_001	Banana	golgi, plastid, vacuole	47.83	44.49
TraesCSU01G194500.1	Wheat	golgi	48.31	43.67
Os11t0546500-00	Rice	golgi, peroxisome, plastid	50.72	43.48
Zm00001d052627_P001	Maize	plastid	47.58	43.01
OQU83610	Sorghum	cytosol, golgi, peroxisome, plastid	49.03	42.38
TraesCSU01G035200.1	Wheat	endoplasmic reticulum, golgi, peroxisome	48.07	41.98
OQU83607	Sorghum	plastid	46.62	41.87
TraesCS6B01G078800.1	Wheat	plastid	47.83	41.86
HORVU4Hr1G089670.1	Barley	endoplasmic reticulum, golgi, peroxisome, plastid	47.58	41.56
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	47.83	41.34
Zm00001d052628_P001	Maize	plasma membrane	47.83	41.34
Solyc03g115740.1.1	Tomato	plastid	38.65	35.56
HORVU0Hr1G025530.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	21.01	35.22
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	36.72	34.0
Solyc01g067930.2.1	Tomato	mitochondrion	11.59	22.86

Protein Annotations

MapMan:21.2.3.1.3	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0010192
GO:GO:0010392	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0051070
InterPro:Glyco_trans_34	InterPro:IPR029044	UniProt:K4BG12	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311
PANTHER:PTHR31311:SF3	EnsemblPlantsGene:Solyc03g043920.2	EnsemblPlants:Solyc03g043920.2.1	TMHMM:TMhelix	UniParc:UPI0002768161	SEG:seg

Description

No Description!

Coordinates

chr3:-:7638298..7641127

Molecular Weight (calculated)

48910.1 Da

IEP (calculated)

6.944

GRAVY (calculated)

-0.416

Length

414 amino acids

Sequence
(BLAST)

001: MTKVSSFFSN VFMFVGGTLV TLSIILALWS FISPKYPKFS TINLDFNLDQ EGSTNFYDEP NLSYTIEKPI QNWDDKRRQW FNLHPSFKLE GEKDRVLIVS
101: GSQSTPCKNP IGDHLLLRFF KNKVDYSRIH GYDIFYNNVL LEPKMFFFWA KLPAIRAAMV AHPEAEWIWW VDSDAAFTDM DFKLPLEKYK NHNFVVYGWP
201: KLIYEKKSWT GINAGVFLIR NCQWSMDLIE AWAKMGPQSP EYNRWGEILR TTFKDKNFPQ SDDQSGLSYL LLKEKDKWGD KIYIESEYYF QGYWVDIIDT
301: LDNITNKYFE IEKKIPILRR RHAEKVVSEI KVWEEYLIKD SYSIRRPFVT HFTGCEPCSG DYNPIYSWET CYNAMQKALN FADNQVLRKY GFVHNNLLDS
401: SSVRPLPFDY PSNS

Best Arabidopsis Sequence Match ( AT2G22900.1 )
(BLAST)

001: MVSPETSSSH YQSSPMAKYA GTRTRPVVCI SDVVLFLGGA FMSLILVWSF FSFSSISPNL TVKNEESSNK CSSGIDMSQD PTDPVYYDDP DLTYTIEKPV
101: KNWDEKRRRW LNLHPSFIPG AENRTVMVTG SQSAPCKNPI GDHLLLRFFK NKVDYCRIHG HDIFYSNALL HPKMNSYWAK LPAVKAAMIA HPEAEWIWWV
201: DSDALFTDMD FTPPWRRYKE HNLVVHGWPG VIYNDRSWTA LNAGVFLIRN CQWSMELIDT WTGMGPVSPE YAKWGQIQRS IFKDKLFPES DDQTALLYLL
301: YKHREVYYPK IYLEGDFYFE GYWLEIVPGL SNVTERYLEM EREDATLRRR HAEKVSERYA AFREERFLKG ERGGKGSKRR PFVTHFTGCQ PCSGDHNKMY
401: DGDTCWNGMI KAINFADNQV MRKYGFVHSD LGKTSPLQPV PFDYPDEPW

Arabidopsis Description

GT7Putative glycosyltransferase 7 [Source:UniProtKB/Swiss-Prot;Acc:O81007]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.