Factsheet for TraesCS7B01G352300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
golgi 4
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G441500.1	Wheat	golgi	91.47	92.97
TraesCS7A01G452400.1	Wheat	golgi	92.86	92.64
HORVU7Hr1G102070.1	Barley	golgi	87.33	85.17
TraesCS4B01G184600.1	Wheat	endoplasmic reticulum, golgi, peroxisome	82.03	79.64
Zm00001d047647_P001	Maize	mitochondrion	60.6	70.89
EER92376	Sorghum	golgi	68.2	66.37
EER92377	Sorghum	golgi	63.59	61.88
Zm00001d028874_P001	Maize	golgi	64.29	61.32
Os03t0305800-02	Rice	golgi	66.82	60.04
Zm00001d047648_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	34.1	53.43
Zm00001d047654_P001	Maize	golgi, plasma membrane	24.88	51.67
Zm00001d047657_P001	Maize	mitochondrion	20.97	51.12
TraesCS4B01G188100.1	Wheat	golgi, mitochondrion	48.62	46.78
TraesCS1B01G115300.1	Wheat	golgi, mitochondrion	48.85	45.4
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	43.09	42.02
TraesCS6B01G221000.1	Wheat	plastid	41.94	38.08
TraesCS6B01G315100.1	Wheat	golgi, plasma membrane	36.87	37.74
TraesCS6B01G078800.1	Wheat	plastid	37.1	34.04
TraesCS4B01G391200.1	Wheat	endoplasmic reticulum	37.56	34.03

Protein Annotations

EnsemblPlants:TraesCS7B01G352300.1	EnsemblPlantsGene:TraesCS7B01G352300	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR31311	PANTHER:PTHR31311:SF7	PFAM:PF05637	PFscan:PS51257	SEG:seg
TMHMM:TMhelix	MapMan:21.2.1.1.2	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:608875199..608876503

Molecular Weight (calculated)

49090.4 Da

IEP (calculated)

6.648

GRAVY (calculated)

-0.338

Length

434 amino acids

Sequence
(BLAST)

001: MAEEQRAAAE RRARRKLLFA VPIIPIVLFI VGSCALFLFA ADLPRIRIEY ACLNGARDAP PTNSKEPPEA VVVQTVRGEE EQRLRQLSDR PYSLGPNVAD
101: YDARRAAWLA AHPGFPAMVA PGRPRVLVVT GSSPRRCTEA EGDHVLLRAF KNKADYCRVH GLDIFYSNAV LDGEMTGFWT KLPLLRALMV AHPEAELLWW
201: VDSDAVFTDM LFEPPWGRYA GHNMVLHGWD GEVYGARNWL GANTGSFVLR NCRWSLDLLD TWARMGPRGP VRDRYGRVFA EALSNRAAWE ADDQSALVYL
301: LATERGRWGE KVFLESAYHL HGFWEEIVGR YEEMRSRWRP GLGDHRWPLV THFVGCKPCG EPGATYDAVA CREGMERALN FADDQILGLY GFQHESLGTT
401: AVRRVRNDTG RPLDDDDEEI GRLLHPEFRA AKEK

Best Arabidopsis Sequence Match ( AT1G74380.1 )
(BLAST)

001: MGQDGSPAHK RPSGSGGGLP TTTLTNGGGR GGRGGLLPRG RQMQKTFNNI KITILCGFVT ILVLRGTIGV GNLGSSSADA VNQNIIEETN RILAEIRSDS
101: DPTDLDEPQE GDMNPNATYV LGPKITDWDS QRKVWLNQNP EFPSTVNGKA RILLLTGSPP KPCDNPIGDH YLLKSVKNKI DYCRLHGIEI VYNMAHLDKE
201: LAGYWAKLPM IRRLMLSHPE VEWIWWMDSD ALFTDILFQI PLARYQKHNL VIHGYPDLLF DQKSWIALNT GSFLLRNCQW SLDLLDAWAP MGPKGPIRDE
301: AGKVLTAYLK GRPAFEADDQ SALIYLLLSQ KDTWMEKVFV ENQYYLHGFW EGLVDRYEEM IEKYHPGLGD ERWPFVTHFV GCKPCGSYAD YAVERCLKSM
401: ERAFNFADNQ VLKLYGFSHR GLLSPKIKRI RNETVSPLEF VDKFDIRRTP VETKPQN

Arabidopsis Description

XXT5Probable xyloglucan 6-xylosyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.