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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • golgi 2
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:cytosol, golgi, mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1B01G115300.1 golgi, golgi
TraesCS4A01G116100.2 golgi, golgi
TraesCS4B01G188100.1 golgi, golgi
TraesCS4D01G189500.1 golgi, golgi
TraesCS5A01G129800.1 golgi, golgi
TraesCS5B01G128600.1 golgi, golgi
TraesCS5D01G137300.1 golgi, golgi
TraesCS6A01G196600.1 golgi, golgi
TraesCS6B01G221000.1 golgi, golgi
TraesCS6D01G181200.1 golgi, golgi

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G62720.1 TraesCS5A01G129800.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS5B01G128600.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS5D01G137300.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS6A01G196600.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS6B01G221000.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS6D01G181200.1 AT1G74380.1 22665445
AT3G62720.1 TraesCS1B01G115300.1 AT4G02500.1 22665445
AT3G62720.1 TraesCS4A01G116100.2 AT4G02500.1 22665445
AT3G62720.1 TraesCS4B01G188100.1 AT4G02500.1 22665445
AT3G62720.1 TraesCS4D01G189500.1 AT4G02500.1 22665445
AT4G02500.1 TraesCS5A01G129800.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS5B01G128600.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS5D01G137300.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS6A01G196600.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS6B01G221000.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS6D01G181200.1 AT1G74380.1 22665445
AT4G02500.1 TraesCS1B01G115300.1 AT4G02500.1 22665445
AT4G02500.1 TraesCS4A01G116100.2 AT4G02500.1 22665445
AT4G02500.1 TraesCS4B01G188100.1 AT4G02500.1 22665445
AT4G02500.1 TraesCS4D01G189500.1 AT4G02500.1 22665445
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G189500.1 Wheat golgi, mitochondrion 99.11 99.33
TraesCS4B01G188100.1 Wheat golgi, mitochondrion 99.11 99.33
HORVU4Hr1G054910.1 Barley golgi, mitochondrion 97.12 97.12
Os03t0300000-01 Rice cytosol 69.91 90.8
Zm00001d026023_P001 Maize endoplasmic reticulum, golgi 52.88 90.19
EER92398 Sorghum golgi 86.5 87.67
Zm00001d025851_P001 Maize cytosol 70.13 87.57
Zm00001d047694_P001 Maize golgi 86.5 87.28
Zm00001d028811_P001 Maize plasma membrane 86.28 87.25
Zm00001d051264_P001 Maize mitochondrion, plastid 75.0 85.39
Zm00001d035801_P001 Maize mitochondrion, nucleus, plastid 34.29 80.31
GSMUA_Achr1P24760_001 Banana mitochondrion 73.67 77.08
GSMUA_Achr8P22410_001 Banana golgi, mitochondrion 70.8 74.59
CDY22055 Canola mitochondrion 72.35 72.83
CDX90935 Canola mitochondrion 71.9 72.38
VIT_07s0005g00150.t01 Wine grape mitochondrion 71.9 71.9
Bra036262.1-P Field mustard mitochondrion 73.01 71.43
CDY18017 Canola mitochondrion 52.88 71.34
KRH37112 Soybean golgi, mitochondrion 71.02 71.33
CDY11443 Canola cytosol 9.29 71.19
Bra000877.1-P Field mustard mitochondrion 72.57 70.84
AT4G02500.1 Thale cress mitochondrion 72.12 70.72
Bra018545.1-P Field mustard mitochondrion 72.12 70.56
KRG96428 Soybean mitochondrion 71.02 70.55
CDY50378 Canola cytosol 72.35 69.72
Bra007696.1-P Field mustard mitochondrion 69.03 68.42
AT3G62720.1 Thale cress mitochondrion 69.47 68.26
VIT_05s0020g01530.t01 Wine grape mitochondrion 70.13 68.03
CDY70090 Canola mitochondrion 53.1 67.8
PGSC0003DMT400058812 Potato mitochondrion 69.47 67.67
CDX76657 Canola mitochondrion 28.54 67.19
CDX93965 Canola mitochondrion 67.92 67.03
Bra014396.1-P Field mustard mitochondrion 67.92 66.88
CDY70418 Canola golgi, mitochondrion 67.92 66.74
CDX97271 Canola mitochondrion 39.38 66.17
KRH12052 Soybean mitochondrion 36.95 62.55
CDY65940 Canola mitochondrion 36.73 62.41
KRH68171 Soybean golgi, mitochondrion 30.75 57.68
CDY11442 Canola cytosol, extracellular, mitochondrion, plastid 10.4 55.29
Solyc01g067930.2.1 Tomato mitochondrion 23.67 50.95
TraesCS6A01G196600.1 Wheat plastid 53.1 50.21
TraesCS5A01G129800.1 Wheat mitochondrion 49.12 49.89
CDY11441 Canola mitochondrion 20.58 49.21
TraesCS7A01G452400.1 Wheat golgi 46.46 48.28
TraesCS4A01G120300.1 Wheat golgi 45.8 47.81
TraesCS4A01G120100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 46.46 47.73
Protein Annotations
EnsemblPlants:TraesCS4A01G116100.2EnsemblPlantsGene:TraesCS4A01G116100Gene3D:3.90.550.10GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016757InterPro:Glyco_trans_34InterPro:IPR029044
InterPro:Nucleotide-diphossugar_transPANTHER:PTHR31311PANTHER:PTHR31311:SF6PFAM:PF05637SEG:segTMHMM:TMhelix
MapMan:21.2.1.1.2:::::
Description
No Description!
Coordinates
chr4A:-:140982095..140983453
Molecular Weight (calculated)
52346.7 Da
IEP (calculated)
7.639
GRAVY (calculated)
-0.516
Length
452 amino acids
Sequence
(BLAST)
001: MWVAERVLGE RRMREIQRFT RNAKLTVVCL MLTILVLRGT VGAGKFGTPQ QDLTELRHRF ISHPQRALSE HHDARSKASD AQAQAAQASA GKAAARDDEP
101: EPQPRSLRDP PYTLGPKISD WDEQRAAWNR RHPETPPFLN DVKPRVMLVT GSSPKPCENP VGDHYLLKSI KNKIDYCRIH GLEIFYNMAL LDAELAGFWA
201: KLPLLRALLL AHPEVEFFWW MDSDAMFTDM AFELPWERYG PYNFILHGWD EMVYDDKNWI GLNTGSFLLR NCQWSLDYLD TWAPMGPKGP VRIEAGKVLT
301: KYLKDRPVFE ADDQSAMVYI LATQREKWGN KVYLENGYYL HGYWGILVDR YEEMLENYQP GLGDHRWPLV THFVGCKPCS KFGDYPVERC LKQMDRAFNF
401: GDNQVLHMYG FEHKSLASRR IKRIRNETSD PLDMKDDYGL LHPAFKALKT ST
Best Arabidopsis Sequence Match ( AT3G62720.1 )
(BLAST)
001: MIEKCIGAHR FRRLQRFMRQ GKVTILCLVL TVIVLRGTIG AGKFGTPEKD IEEIREHFFY TRKRGEPHRV LVEVSSKTTS SEDGGNGGNS YETFDINKLF
101: VDEGDEEKSR DRTNKPYSLG PKISDWDEQR RDWLKQNPSF PNFVAPNKPR VLLVTGSAPK PCENPVGDHY LLKSIKNKID YCRIHGIEIF YNMALLDAEM
201: AGFWAKLPLI RKLLLSHPEI EFLWWMDSDA MFTDMVFELP WERYKDYNLV MHGWNEMVYD QKNWIGLNTG SFLLRNSQWS LDLLDAWAPM GPKGKIREEA
301: GKVLTRELKD RPAFEADDQS AMVYLLATER EKWGGKVYLE SGYYLHGYWG ILVDRYEEMI ENHKPGFGDH RWPLVTHFVG CKPCGKFGDY PVERCLRQMD
401: RAFNFGDNQI LQMYGFTHKS LGSRRVKPTR NQTDRPLDAK DEFGLLHPPF KAAKLSTTTT
Arabidopsis Description
XXT1XXT1 [Source:UniProtKB/TrEMBL;Acc:A0A178VEJ0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.