Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19235 | Canola | cytosol, golgi, plasma membrane, plastid | 74.46 | 84.51 |
| CDY26738 | Canola | golgi, mitochondrion, plasma membrane, plastid | 77.97 | 82.99 |
| AT1G74380.1 | Thale cress | plastid | 72.71 | 81.62 |
| Bra025677.1-P | Field mustard | golgi, mitochondrion, plasma membrane, plastid | 78.17 | 79.72 |
| HORVU6Hr1G040960.1 | Barley | cytosol | 36.65 | 78.33 |
| PGSC0003DMT400073000 | Potato | cytosol | 35.48 | 75.52 |
| AT5G07720.1 | Thale cress | cytosol, plastid | 66.47 | 74.62 |
| VIT_17s0000g06590.t01 | Wine grape | cytosol, golgi, plasma membrane, plastid | 64.33 | 73.33 |
| KRH56886 | Soybean | endoplasmic reticulum | 63.74 | 73.15 |
| KRH03516 | Soybean | mitochondrion | 63.35 | 72.71 |
| PGSC0003DMT400063414 | Potato | plastid | 61.01 | 69.56 |
| PGSC0003DMT400041333 | Potato | plastid | 61.4 | 69.38 |
| Solyc03g115740.1.1 | Tomato | plastid | 60.62 | 69.11 |
| GSMUA_Achr10P... | Banana | cytosol | 54.19 | 64.06 |
| Solyc05g013020.1.1 | Tomato | golgi, mitochondrion, plastid | 55.36 | 63.53 |
| TraesCS5B01G128600.1 | Wheat | golgi, mitochondrion | 53.41 | 61.57 |
| TraesCS5A01G129800.1 | Wheat | mitochondrion | 53.41 | 61.57 |
| TraesCS5D01G137300.1 | Wheat | golgi, mitochondrion | 53.41 | 61.57 |
| TraesCS6D01G181200.1 | Wheat | plastid | 57.12 | 61.3 |
| HORVU5Hr1G042000.1 | Barley | golgi, mitochondrion | 52.83 | 61.17 |
| TraesCS6A01G196600.1 | Wheat | plastid | 56.92 | 61.09 |
| TraesCS6B01G221000.1 | Wheat | plastid | 56.92 | 61.09 |
| GSMUA_Achr3P22760_001 | Banana | cytosol | 54.58 | 61.0 |
| Os02t0529600-01 | Rice | golgi, peroxisome, plastid | 56.92 | 60.83 |
| Zm00001d016687_P001 | Maize | plasma membrane | 56.34 | 60.46 |
| EES06903 | Sorghum | plastid | 55.75 | 59.58 |
| Os12t0149300-01 | Rice | golgi | 52.83 | 58.15 |
| GSMUA_Achr10P... | Banana | plastid | 56.73 | 57.74 |
| Zm00001d023399_P001 | Maize | golgi, mitochondrion | 49.9 | 56.14 |
| Zm00001d023417_P001 | Maize | golgi, mitochondrion | 49.71 | 55.92 |
| EES16639 | Sorghum | golgi | 50.49 | 55.7 |
| GSMUA_Achr11P... | Banana | cytosol | 54.0 | 54.53 |
| AT4G02500.1 | Thale cress | mitochondrion | 46.0 | 51.19 |
| AT3G62720.1 | Thale cress | mitochondrion | 45.03 | 50.22 |
| EES15672 | Sorghum | mitochondrion | 41.91 | 41.75 |
| Zm00001d023398_P001 | Maize | mitochondrion | 41.13 | 41.13 |
| Zm00001d043041_P001 | Maize | nucleus | 23.2 | 40.34 |
| AT4G38310.1 | Thale cress | nucleus | 9.16 | 39.17 |
| AT4G37690.1 | Thale cress | golgi | 29.24 | 34.72 |
| AT2G22900.1 | Thale cress | plastid | 29.43 | 33.63 |
| Zm00001d023418_P001 | Maize | nucleus | 41.33 | 20.56 |
Protein Annotations
| MapMan:21.2.1.1.2 | Gene3D:3.90.550.10 | EntrezGene:838450 | ProteinID:AAF27110.1 | ProteinID:AEE29746.1 | EMBL:AK175316 |
| EMBL:AK229765 | ProteinID:ANM58179.1 | ProteinID:ANM58180.1 | ProteinID:ANM58181.1 | ArrayExpress:AT1G18690 | EnsemblPlantsGene:AT1G18690 |
| RefSeq:AT1G18690 | TAIR:AT1G18690 | RefSeq:AT1G18690-TAIR-G | EnsemblPlants:AT1G18690.4 | GO:GO:0000139 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005794 | GO:GO:0005802 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009969 | GO:GO:0009987 | GO:GO:0010411 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0016757 | GO:GO:0016758 | GO:GO:0033843 | GO:GO:0035252 | InterPro:Glyco_trans_34 | InterPro:IPR029044 |
| EMBL:KJ139001 | RefSeq:NP_001319036.1 | RefSeq:NP_001320634.1 | RefSeq:NP_001320635.1 | RefSeq:NP_173304.2 | InterPro:Nucleotide-diphossugar_trans |
| PFAM:PF05637 | PANTHER:PTHR31311 | PANTHER:PTHR31311:SF4 | UniProt:Q9M9U0 | TMHMM:TMhelix | UniParc:UPI00000A36FC |
| SEG:seg | : | : | : | : | : |
Description
XXT4Xyloglucan 6-xylosyltransferase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9U0]
Coordinates
chr1:+:6433688..6436922
Molecular Weight (calculated)
58316.9 Da
IEP (calculated)
6.382
GRAVY (calculated)
-0.292
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQDGSRSSG SGRGLSTTAV SNGGWRTRGF LRGWQIQNTL FNNIKFMILC CFVTILILLG TIRVGNLGSS NADSVNQSFI KETIPILAEI PSDSHSTDLA
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
101: EPPKADVSPN ATYTLEPRIA EIPSDVHSTD LVELPKADIS PNATYTLGPR IAEIPSDSHL TDLLEPPKAD ISPNATYTLG PKITNWDSQR KVWLNQNPEF
201: PNIVNGKARI LLLTGSSPGP CDKPIGNYYL LKAVKNKIDY CRLHGIEIVY NMANLDEELS GYWTKLPMIR TLMLSHPEVE WIWWMDSDAL FTDILFEIPL
301: PRYENHNLVI HGYPDLLFNQ KSWVALNTGI FLLRNCQWSL DLLDAWAPMG PKGKIRDETG KILTAYLKGR PAFEADDQSA LIYLLLSQKE KWIEKVYVEN
401: QYYLHGFWEG LVDRYEEMIE KYHPGLGDER WPFVTHFVGC KPCGSYADYA VDRCFKSMER AFNFADNQVL KLYGFSHRGL LSPKIKRIRN ETVSPLESVD
501: KFDIRRMHME TKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.