Factsheet for Bra009305.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69995	Canola	cytosol	99.78	99.78
AT5G07720.1	Thale cress	cytosol, plastid	89.45	89.06
Bra008146.1-P	Field mustard	cytosol	42.42	86.55
Bra015915.1-P	Field mustard	plastid	81.1	80.92
Bra003804.1-P	Field mustard	plastid	79.34	78.99
HORVU6Hr1G040960.1	Barley	cytosol	40.88	77.5
VIT_17s0000g06590.t01	Wine grape	cytosol, golgi, plasma membrane, plastid	76.48	77.33
KRH03516	Soybean	mitochondrion	74.95	76.29
KRH56886	Soybean	endoplasmic reticulum	74.95	76.29
PGSC0003DMT400073000	Potato	cytosol	40.0	75.52
PGSC0003DMT400041333	Potato	plastid	73.85	74.01
PGSC0003DMT400063414	Potato	plastid	72.97	73.78
Solyc03g115740.1.1	Tomato	plastid	72.09	72.89
Solyc05g013020.1.1	Tomato	golgi, mitochondrion, plastid	65.93	67.11
GSMUA_Achr10P...	Banana	cytosol	63.96	67.05
Bra025677.1-P	Field mustard	golgi, mitochondrion, plasma membrane, plastid	73.41	66.4
TraesCS5B01G128600.1	Wheat	golgi, mitochondrion	63.3	64.72
HORVU5Hr1G042000.1	Barley	golgi, mitochondrion	62.86	64.56
GSMUA_Achr3P22760_001	Banana	cytosol	64.84	64.27
TraesCS5D01G137300.1	Wheat	golgi, mitochondrion	62.86	64.27
TraesCS5A01G129800.1	Wheat	mitochondrion	62.86	64.27
Zm00001d016687_P001	Maize	plasma membrane	67.03	63.81
EES06903	Sorghum	plastid	66.59	63.12
TraesCS6D01G181200.1	Wheat	plastid	66.15	62.97
TraesCS6A01G196600.1	Wheat	plastid	65.93	62.76
TraesCS6B01G221000.1	Wheat	plastid	65.93	62.76
Os02t0529600-01	Rice	golgi, peroxisome, plastid	65.93	62.5
Os12t0149300-01	Rice	golgi	60.88	59.44
GSMUA_Achr10P...	Banana	plastid	64.18	57.94
Zm00001d023399_P001	Maize	golgi, mitochondrion	56.7	56.58
Zm00001d023417_P001	Maize	golgi, mitochondrion	56.48	56.36
EES16639	Sorghum	golgi	57.58	56.34
GSMUA_Achr11P...	Banana	cytosol	62.2	55.71
Bra036262.1-P	Field mustard	mitochondrion	55.16	54.33
Bra000877.1-P	Field mustard	mitochondrion	54.95	54.0
Bra018545.1-P	Field mustard	mitochondrion	54.73	53.9
Bra014396.1-P	Field mustard	mitochondrion	53.63	53.16
Bra007696.1-P	Field mustard	mitochondrion	53.19	53.07
EES15672	Sorghum	mitochondrion	48.57	42.91
Zm00001d023398_P001	Maize	mitochondrion	47.25	41.91
Zm00001d043041_P001	Maize	nucleus	26.15	40.34
Bra017847.1-P	Field mustard	golgi	35.16	36.53
Bra039938.1-P	Field mustard	golgi, plastid	35.16	35.71
Zm00001d023418_P001	Maize	nucleus	47.69	21.05

Protein Annotations

MapMan:21.2.1.1.2	Gene3D:3.90.550.10	EnsemblPlantsGene:Bra009305	EnsemblPlants:Bra009305.1	EnsemblPlants:Bra009305.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010411	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:Glyco_trans_34
InterPro:IPR029044	UniProt:M4CYK8	InterPro:Nucleotide-diphossugar_trans	PFAM:PF05637	PANTHER:PTHR31311	PANTHER:PTHR31311:SF4
UniParc:UPI000254398B	SEG:seg	:	:	:	:

Description

AT5G07720 (E=1e-232) | galactosyl transferase GMA12/MNN10 family protein

Coordinates

chrA10:+:16071715..16073082

Molecular Weight (calculated)

51786.3 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.370

Length

455 amino acids

Sequence
(BLAST)

001: MGKEDGFKTQ KRVSTSVSAG VLPTTIATPG GRKPPPRGKQ IKKTFNNLKM TILCGLVTIL VLRGTIGVNF GTSEADAVNQ NLIEETNRLL AEIRSDSDPT
101: DPNDPPDSDL DLNATYTLGP KITNWDKQRA TWLTQNPNFP SSLAGKPRVL LLTGSPPKPC DNPIGDHYLL KSVKNKIDYC RIHGIEIVYN MAHLDKELAG
201: YWAKLPMLRR LMLSHPEIEW IWWMDSDALF TDMVFEVPLS RYENHNLVIH GYPDLLYDQK SWIALNTGSF LFRNCQWSLD LLDVWAPMGP KGPIREEAGK
301: VLTAFLKGRP AFEADDQSAL IYLLLSEKDT WMGKVFVENQ YYLHGFWEGL VDRYEEMMDK YHPGLGDERW PFVTHFVGCK PCGSYADYAV EHCLKSMERA
401: YNFADNQVLK LYGFGHRGLL SPKIKRIRNE TISPLKFVNR FDIRRAAPLK IEARS

Best Arabidopsis Sequence Match ( AT5G07720.1 )
(BLAST)

001: MGKEDGFRTQ KRVSTASSAA AGVLPTTMAS GGVRRPPPRG RQIQKTFNNV KMTILCGFVT ILVLRGTIGI NFGTSDADVV NQNIIEETNR LLAEIRSDSD
101: PTDSNEPPDS DLDLNMTYTL GPKITNWDQK RKLWLTQNPD FPSFINGKAK VLLLTGSPPK PCDNPIGDHY LLKSVKNKID YCRIHGIEIV YNMAHLDKEL
201: AGYWAKLPMI RRLMLSHPEI EWIWWMDSDA LFTDMVFEIP LSRYENHNLV IHGYPDLLFD QKSWIALNTG SFLFRNCQWS LDLLDAWAPM GPKGPIREEA
301: GKILTANLKG RPAFEADDQS ALIYLLLSQK ETWMEKVFVE NQYYLHGFWE GLVDKYEEMM EKYHPGLGDE RWPFITHFVG CKPCGSYADY AVERCLKSME
401: RAFNFADNQV LKLYGFGHRG LLSPKIKRIR NETTFPLKFV DRFDIRRTTP LKIEARS

Arabidopsis Description

XXT3Probable xyloglucan 6-xylosyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF80]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.