Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G073020.3 | Barley | cytosol, mitochondrion, peroxisome | 21.71 | 3.87 |
| HORVU6Hr1G078160.1 | Barley | plastid | 22.48 | 3.32 |
| HORVU2Hr1G096300.1 | Barley | plastid | 3.88 | 1.1 |
| HORVU6Hr1G092910.1 | Barley | nucleus | 14.73 | 1.05 |
| HORVU2Hr1G121050.1 | Barley | peroxisome | 3.1 | 0.81 |
| HORVU2Hr1G121060.1 | Barley | plastid | 2.33 | 0.61 |
| HORVU7Hr1G090410.1 | Barley | vacuole | 2.33 | 0.6 |
| HORVU6Hr1G042330.1 | Barley | cytosol | 1.55 | 0.53 |
| HORVU7Hr1G118240.1 | Barley | endoplasmic reticulum, golgi, vacuole | 1.55 | 0.4 |
| HORVU7Hr1G118260.1 | Barley | plasma membrane, vacuole | 1.55 | 0.4 |
| HORVU4Hr1G071450.1 | Barley | mitochondrion | 1.55 | 0.35 |
| HORVU3Hr1G066920.4 | Barley | extracellular | 0.78 | 0.19 |
| HORVU1Hr1G057320.1 | Barley | extracellular, peroxisome | 0.0 | 0.0 |
| HORVU6Hr1G091060.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G057290.1 | EnsemblPlantsGene:HORVU1Hr1G057290 | SEG:seg | UniParc:UPI000B47054B | UniProt:A0A287FRC6 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr1H:+:418960941..418961762
Molecular Weight (calculated)
14249.2 Da
IEP (calculated)
10.943
GRAVY (calculated)
-0.805
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: KSPAILKVEL GGPQKKNATE GGKKEQHHSN KSLFQQLQSH FNQQQQLYVY TLLSRQQAME LREVRGGDEM RLHYLCETLG VKLVGRKGLG PGADAVIASI
101: KADRNSSRTK SGPSKLRVRV SKPQPSAKS
101: KADRNSSRTK SGPSKLRVRV SKPQPSAKS
001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSG
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSG
Arabidopsis Description
FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.