Factsheet for HORVU2Hr1G096300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g033080.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	43.52	57.06
TraesCS2B01G425100.1	Wheat	plastid	91.87	51.8
TraesCS2D01G404400.1	Wheat	plastid	91.43	49.7
TraesCS2A01G407400.1	Wheat	cytosol	91.21	49.52
Os04t0560300-01	Rice	cytosol	83.96	47.1
EES12649	Sorghum	plastid	82.64	46.53
Zm00001d002684_P001	Maize	extracellular	81.98	46.16
PGSC0003DMT400060365	Potato	plastid	54.07	45.39
PGSC0003DMT400060071	Potato	peroxisome	43.52	40.24
GSMUA_Achr4P25280_001	Banana	plastid	67.03	39.77
Solyc05g055590.1.1	Tomato	cytosol	53.41	38.27
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	8.57	35.45
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	43.52	34.14
KRH71619	Soybean	cytosol	61.76	32.08
CDY00667	Canola	cytosol, plastid	62.2	30.96
Bra001357.1-P	Field mustard	nucleus, plastid	62.2	30.76
CDX73929	Canola	nucleus, plastid	62.2	30.69
AT3G10390.3	Thale cress	plastid	61.98	30.13
VIT_13s0019g04820.t01	Wine grape	nucleus	66.37	29.43
PGSC0003DMT400019222	Potato	cytosol, plastid	61.98	28.31
Solyc11g008320.1.1	Tomato	nucleus	62.42	28.29
HORVU7Hr1G073020.3	Barley	cytosol, mitochondrion, peroxisome	39.56	24.86
HORVU6Hr1G078160.1	Barley	plastid	44.62	23.25
HORVU2Hr1G121060.1	Barley	plastid	18.68	17.38
HORVU2Hr1G121050.1	Barley	peroxisome	18.02	16.67
HORVU7Hr1G118260.1	Barley	plasma membrane, vacuole	15.38	14.06
HORVU7Hr1G118240.1	Barley	endoplasmic reticulum, golgi, vacuole	14.73	13.54
HORVU3Hr1G066920.4	Barley	extracellular	14.95	13.18
HORVU7Hr1G090410.1	Barley	vacuole	14.29	12.92
HORVU4Hr1G071450.1	Barley	mitochondrion	14.51	11.62
HORVU6Hr1G091060.1	Barley	cytosol	9.45	9.89
HORVU6Hr1G042330.1	Barley	cytosol	7.25	8.82
HORVU6Hr1G092910.1	Barley	nucleus	29.45	7.37
HORVU1Hr1G057290.1	Barley	cytosol	1.1	3.88

Protein Annotations

Gene3D:1.10.10.10	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	UniProt:A0A287J1R0	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G096300	EnsemblPlants:HORVU2Hr1G096300.1
InterPro:Homeobox-like_sf	InterPro:IPR007526	InterPro:IPR036188	InterPro:IPR036388	PFAM:PF01593	PFAM:PF04433
PFscan:PS50934	PANTHER:PTHR10742	PANTHER:PTHR10742:SF260	SUPFAM:SSF46689	SUPFAM:SSF51905	InterPro:SWIRM
UniParc:UPI000B47810D	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:673848612..673856734

Molecular Weight (calculated)

48664.2 Da

IEP (calculated)

6.750

GRAVY (calculated)

-0.173

Length

455 amino acids

Sequence
(BLAST)

001: MSDQQPPSTL LPLASLPPNP NPNPTPPPVP ALHISALPSP SKRKRTGFRR KVPSAASPAP HPPVPPSAAD DIIVINREPT AEAVTALTAG FPADSLTDEE
101: IEAGVVSDVG GIEQVNYILI RNHLLTRWRE TFNSWLAKEP FASLIPPHCE HLLTSAYNFL VSHGHVNFGV APAIKERIPK EPTRPNTVIV VGAGLAGLAA
201: ARHLLVSGFK VIVLEGRKRC GGRVYTKKME GGGRSAAADL GGSVLTGTSG NPLGIVAKQL GLPMHKIRDK CPLYRPDGSP VDPEVDKEVE GTYNKFLDNA
301: SHMREKMGDV AMDISLGAAL ETLRQSDGGI SSEEEINLFN WHIANLEYAN AGLSSRLSFA FWDQDDPYDM GGDHCFLPGG NGRLVQALAE NVPIVYERTA
401: HTIRYGGDGV QVVVNGGQVY EGDMALCTVP LGVLKNGVSS LYLSCHKGSL IVSRN

Best Arabidopsis Sequence Match ( AT3G10390.1 )
(BLAST)

001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.