Factsheet for Bra001357.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73929	Canola	nucleus, plastid	99.57	99.35
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	10.0	83.64
AT3G10390.3	Thale cress	plastid	83.8	82.37
PGSC0003DMT400060071	Potato	peroxisome	38.8	72.56
GSMUA_Achr4P25280_001	Banana	plastid	59.35	71.19
KRH71619	Soybean	cytosol	65.98	69.29
Os04t0560300-01	Rice	cytosol	60.33	68.43
Zm00001d002684_P001	Maize	extracellular	59.35	67.57
TraesCS2B01G425100.1	Wheat	plastid	59.13	67.41
EES12649	Sorghum	plastid	59.02	67.2
Solyc02g033080.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	24.67	65.42
TraesCS2D01G404400.1	Wheat	plastid	58.8	64.64
TraesCS2A01G407400.1	Wheat	cytosol	58.7	64.44
Solyc05g055590.1.1	Tomato	cytosol	43.7	63.31
HORVU2Hr1G096300.1	Barley	plastid	30.76	62.2
PGSC0003DMT400019222	Potato	cytosol, plastid	65.54	60.54
VIT_13s0019g04820.t01	Wine grape	nucleus	66.96	60.04
Solyc11g008320.1.1	Tomato	nucleus	64.57	59.16
PGSC0003DMT400060365	Potato	plastid	33.26	56.46
Bra027014.1-P	Field mustard	cytosol	39.57	52.15
Bra021500.1-P	Field mustard	cytosol	40.54	51.03
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	28.48	45.17
Bra000284.1-P	Field mustard	cytosol	15.98	30.62
Bra037741.1-P	Field mustard	peroxisome	15.98	30.31
Bra004737.1-P	Field mustard	peroxisome	15.98	30.0
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	15.87	29.38
Bra003362.1-P	Field mustard	cytosol	15.54	29.24
Bra024137.1-P	Field mustard	mitochondrion	14.67	26.21
Bra011132.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	14.46	24.58
Bra006210.1-P	Field mustard	extracellular	11.2	21.87
Bra040571.1-P	Field mustard	nucleus	27.39	15.96

Protein Annotations

Gene3D:1.10.10.10	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	Gene3D:3.90.660.10	InterPro:Amino_oxidase	EnsemblPlantsGene:Bra001357
EnsemblPlants:Bra001357.1	EnsemblPlants:Bra001357.1-P	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:Homeobox-like_sf	InterPro:IPR007526	InterPro:IPR036188	InterPro:IPR036388	UniProt:M4CAX8
PFAM:PF01593	PFAM:PF04433	PFscan:PS50934	PANTHER:PTHR10742	PANTHER:PTHR10742:SF260	SUPFAM:SSF46689
SUPFAM:SSF51905	SUPFAM:SSF54373	InterPro:SWIRM	UniParc:UPI000254062A	InterPro:WH-like_DNA-bd_sf	SEG:seg

Description

AT3G10390 (E=0.0) FLD | FLD (FLOWERING LOCUS D); amine oxidase/ electron carrier/ oxidoreductase

Coordinates

chrA03:+:15993218..15996354

Molecular Weight (calculated)

100179.0 Da

IEP (calculated)

7.544

GRAVY (calculated)

-0.327

Length

920 amino acids

Sequence
(BLAST)

001: MNPPDNNQDN APSTPHSQLP TPPPQSNSNP NPDPTSISIS NPSFEQMVSF SAPKKRRRGR SQRSTSSFHT LPNPGGLLPN IDAAPRSTNP GIGDEIITIN
101: KDATTEALLA LTAGFPADSL TEEEIDFGVV PVVGGIEQVN YILIRNHIIS KWRENISSWI AKESFLDSIP NHCISLLDSA YDYLVLHGYI NFGISQAVKE
201: KVPPTQQQQS KPSVVIVGAG LSGLAAARQL LRFGFKVTVL EGRKRPGGRV YTKRMEGNRV EAAADLGGSV LTGTLGNPLG IIARQLGCSL YKVRDKCPLY
301: RVDGKPVDPD LDMKVEGAFN RLLDKASKLR QLMGDVSMDV SLGAALETFR QVYGDATEEM SLFNWHLANL EYANAGLVSK LSLAFWDQDD PYDMGGDHCF
401: LPGGNGRLVH ALAENVPILY EKTVQTIRYG ADGVKVTAGH QVYEGDMVLC TVPLGVLKNG SIKFVPELPQ RKLDCIKRLG FGLLNKVAML FPFVFWGTDL
501: DTFGHLTEDP ANRGEFFLFY SYAQVAGGPL LIALVAGEAA HKFETMPPTD AVTRVLQILR GMYEPQGINV PDPIQTVCTR WGGDPFSFGS YSNVAVGASG
601: DDYDILAESV GDGRLFFAGE ATTRRYPATM HGAFVTGLRE AANMAQSAKS RGIRKRIDRN PSKNPHACAT LLADLFRDPD LEFGSFSIIF SRRNPDPKSP
701: AILRVTLSEP CKRNEDPVAD QYSNKILFQQ LQSHFNQQQQ IQVYTLLTRQ QALYLREVRG GDEKRLYYLC ETLGVKLVGR KGLGIGADSV IASIKAERTG
801: RKPALSSSGT KSGMLKVKSS ALKRKLIRIK GPVPLNQNNN GDSETVKHES LGNGKASMQA TIAEAIGSSN TQEESKWLST GVASSSDDGM SEQNLTQANE
901: FDEDKNKCSS GLNSDPSQAT

Best Arabidopsis Sequence Match ( AT3G10390.3 )
(BLAST)

001: MNPPDNYVPS VSHSQFSTPP PPQSSSNTNT ETSLNPFPNS ISTSISNPSF EQMVSFSAPK KRRRGRSQRS MSSLNSLPVP NVGLLPGNSN FVSSSASSSG
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GGSLHVGGET MKKIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.