Factsheet for Solyc02g033080.1.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

cytosol 2
nucleus 2
peroxisome 1
plastid 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060365	Potato	plastid	83.29	53.32
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	87.03	52.07
Solyc05g055590.1.1	Tomato	cytosol	91.64	50.08
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	14.41	45.45
HORVU2Hr1G096300.1	Barley	plastid	57.06	43.52
GSMUA_Achr4P25280_001	Banana	plastid	63.98	28.94
Os04t0560300-01	Rice	cytosol	65.71	28.11
TraesCS2B01G425100.1	Wheat	plastid	64.84	27.88
Zm00001d002684_P001	Maize	extracellular	64.84	27.85
EES12649	Sorghum	plastid	64.55	27.72
TraesCS2D01G404400.1	Wheat	plastid	64.55	26.76
TraesCS2A01G407400.1	Wheat	cytosol	64.55	26.73
KRH71619	Soybean	cytosol	66.28	26.26
AT3G10390.3	Thale cress	plastid	67.72	25.11
Solyc07g063500.2.1	Tomato	cytosol, mitochondrion, nucleus	54.47	25.03
CDY00667	Canola	cytosol, plastid	65.71	24.95
Solyc11g008320.1.1	Tomato	nucleus	71.76	24.8
CDX73929	Canola	nucleus, plastid	65.71	24.73
Bra001357.1-P	Field mustard	nucleus, plastid	65.42	24.67
VIT_13s0019g04820.t01	Wine grape	nucleus	69.16	23.39
Solyc07g063450.1.1	Tomato	cytosol	53.31	20.22
Solyc12g006370.1.1	Tomato	plastid	25.94	18.44
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	25.94	18.37
Solyc03g031880.2.1	Tomato	cytosol	25.07	18.2
Solyc02g081390.2.1	Tomato	cytosol	25.65	17.98
Solyc05g018880.1.1	Tomato	endoplasmic reticulum	22.48	15.23
Solyc07g039310.1.1	Tomato	golgi	22.48	15.2
Solyc03g007160.1.1	Tomato	plasma membrane, vacuole	7.49	14.05
Solyc01g087590.2.1	Tomato	vacuole	18.16	12.68
Solyc12g008850.1.1	Tomato	cytosol	23.92	12.35
Solyc04g081100.2.1	Tomato	nucleus	34.58	5.77

Protein Annotations

EnsemblPlants:Solyc02g033080.1.1	EnsemblPlantsGene:Solyc02g033080.1	Gene3D:3.50.50.60	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf	InterPro:IPR036188
ncoils:Coil	PANTHER:PTHR10742	PANTHER:PTHR10742:SF260	PFAM:PF01593	SEG:seg	SUPFAM:SSF51905
UniParc:UPI000276771B	UniProt:K4B5Q1	MapMan:12.3.3.8.1	:	:	:

Description

No Description!

Coordinates

chr2:+:29735896..29737123

Molecular Weight (calculated)

37935.0 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.018

Length

347 amino acids

Sequence
(BLAST)

001: MVKSRISKKK LVSDEIICIN NESYPEALVA LTAGFPSGSL KDEEIEAGVV SEDGGTEMLS YGYVNCGVTL AIKDKIPTSP SKGRVIVIGA GLAGLAAARQ
101: LMLFGFEVIV LEGRKRVGGR VYTKKMEGGN KIAASDLGES VLTGTLGNPL GVLARQLSYT LHTTSIWIKK VEVAYNELLD KANKVRQDLS PIISLGEALE
201: TLREDSSVSM NDEEMNLFNW HLANLEYANA SLLSKLSLAF WDQDDSYDMG GDHHFLPGGN GRLIHALAEN VPISFEKTVH TIRYSRDRVK VITAGQVFEG
301: DMVLCTAPLG VLKRGSIRFF PEFPQRKLDT IRRLGFGLLN KVALLFP

Best Arabidopsis Sequence Match ( AT3G10390.1 )
(BLAST)

001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.