Factsheet for TraesCS2B01G425100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G057320.1	Barley	extracellular, peroxisome	13.38	98.18
TraesCS2D01G404400.1	Wheat	plastid	98.76	95.22
TraesCS2A01G407400.1	Wheat	cytosol	98.76	95.11
HORVU2Hr1G096300.1	Barley	plastid	51.8	91.87
Os04t0560300-01	Rice	cytosol	86.86	86.44
EES12649	Sorghum	plastid	85.13	85.02
Zm00001d002684_P001	Maize	extracellular	84.63	84.53
GSMUA_Achr4P25280_001	Banana	plastid	70.14	73.79
PGSC0003DMT400060071	Potato	peroxisome	42.01	68.9
Solyc02g033080.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	27.88	64.84
KRH71619	Soybean	cytosol	67.41	62.1
Solyc05g055590.1.1	Tomato	cytosol	47.83	60.79
CDY00667	Canola	cytosol, plastid	67.53	59.63
Bra001357.1-P	Field mustard	nucleus, plastid	67.41	59.13
CDX73929	Canola	nucleus, plastid	67.41	59.0
AT3G10390.3	Thale cress	plastid	67.78	58.44
VIT_13s0019g04820.t01	Wine grape	nucleus	70.38	55.36
PGSC0003DMT400019222	Potato	cytosol, plastid	66.54	53.92
Solyc11g008320.1.1	Tomato	nucleus	66.42	53.39
PGSC0003DMT400060365	Potato	plastid	35.69	53.14
TraesCS6B01G348300.1	Wheat	nucleus	47.46	46.42
TraesCS7B01G206700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	43.25	45.92
Solyc05g055580.1.1	Tomato	cytosol, peroxisome, plastid	32.09	44.66
TraesCS2B01G579100.1	Wheat	plastid	19.7	32.45
TraesCS2B01G579000.1	Wheat	peroxisome	19.58	30.04
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	17.84	29.75
TraesCS3B01G280200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	16.36	26.04
TraesCS7B01G461800.1	Wheat	plasma membrane, vacuole	15.12	24.65
TraesCS4B01G265900.1	Wheat	vacuole	14.75	24.14
TraesCS4B01G385300.1	Wheat	endoplasmic reticulum	14.25	23.91
TraesCS7B01G280700.1	Wheat	cytosol	14.0	23.69
TraesCS6B01G449900.1	Wheat	nucleus	30.86	13.49

Protein Annotations

Gene3D:1.10.10.10	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	Gene3D:3.90.660.10	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Homeobox-like_sf	InterPro:IPR007526
InterPro:IPR036188	InterPro:IPR036388	PFAM:PF01593	PFAM:PF04433	PFscan:PS50934	PANTHER:PTHR10742
PANTHER:PTHR10742:SF260	SUPFAM:SSF46689	SUPFAM:SSF51905	SUPFAM:SSF54373	InterPro:SWIRM	EnsemblPlantsGene:TraesCS2B01G425100
EnsemblPlants:TraesCS2B01G425100.1	InterPro:WH-like_DNA-bd_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2B:+:611063234..611065891

Molecular Weight (calculated)

86763.7 Da

IEP (calculated)

8.069

GRAVY (calculated)

-0.201

Length

807 amino acids

Sequence
(BLAST)

001: MSDQQPPSTL LPLASLPPNP NPNPTPPPVP APTLALHIPA IPSPSKRKRT GFRRKVPSAA SPAPHPPVPP SAADDIIVIN REPTAEAVTA LTAGFPADSL
101: TDEEIEAGVV SDVGGIEQVN YILIRNHLLT RWRETFNSWL AKEPFASLIP PHCEHLLTSA YNFLVSHGHV NFGVAPAIKE RLPKEPTRPN TVIVVGAGLA
201: GLAAARHLLA SGFKVIVLEG RKRCGGRVYT KKMEGGGHSA AADLGGSVLT GTFGNPLGVV AKQLGLPMHK IRDKCPLYRP DGSPVDPEVD KEVEGTYNKF
301: LDNASHLRAA MGDVAMDISL GAALETLRQS DGGISSEEEI NLFNWHIANL EYANAGLSSR LSLAFWDQDD PYDMGGDHCF LPGGNGRLVQ ALAENVPIVY
401: ERTVHTIRYG GDGVQVVVNG GQVYEGDMAL CTVPLGVLKN GGIKFVPELP QRKLDSIKKL GFGLLNKVAM LFPHVFWSAD LDTFGHLTEN PSRRGEFFLF
501: YSYATVAGGP LLMALVAGEA AHNFETTPPT DAVSSVLQIL RGIYEPQGVE VPDPLQSVCT RWGTDSFSLG SYSHVAVGAS GDDYDILAES VGDGRLFFAG
601: EATTRRYPAT MHGAFITGVR EAANINIHAT ARATKTKVVK SPSTNAQACA TLLVDLFRQP DLEFGSFSVI FGRKASDPKS PAILKVELGG PQKKSATEGG
701: KKEQHHSNKS LFQQLQSHFN QQQQLYVYTL LSRQQAMELR EVRGGDEMRL HYLCETLGVK LVGRKGLGPG ADAVIASIKA DRNSSRTKSG PSKLRVRVSK
801: PQPSAKS

Best Arabidopsis Sequence Match ( AT3G10390.1 )
(BLAST)

001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ

Arabidopsis Description

FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.