Factsheet for TraesCS4B01G265900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G265800.1	Wheat	unclear	93.91	93.91
HORVU6Hr1G042330.1	Barley	cytosol	67.75	89.3
TraesCS4A01G039600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	83.16	87.61
TraesCS4B01G385300.1	Wheat	endoplasmic reticulum	82.35	84.41
Zm00001d024281_P001	Maize	extracellular	81.54	80.4
HORVU4Hr1G071450.1	Barley	mitochondrion	91.68	79.58
Os09t0368500-01	Rice	golgi	74.44	77.43
Os09t0368200-00	Rice	golgi, vacuole	77.28	76.81
TraesCS7B01G461800.1	Wheat	plasma membrane, vacuole	73.83	73.54
OQU80059	Sorghum	peroxisome	80.73	71.07
TraesCS7B01G280700.1	Wheat	cytosol	67.95	70.23
Os03t0193400-00	Rice	nucleus, peroxisome	27.38	66.83
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	36.71	66.54
VIT_01s0127g00770.t01	Wine grape	cytosol	11.56	62.64
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	61.66	61.41
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	58.62	57.23
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	54.97	55.42
KRH39911	Soybean	plasma membrane	43.41	46.02
KRH13982	Soybean	plasma membrane	44.42	43.71
CDX70516	Canola	extracellular	41.58	43.52
AT5G13700.1	Thale cress	extracellular	41.58	43.43
Bra006210.1-P	Field mustard	extracellular	41.38	43.31
KRH32977	Soybean	plasma membrane	43.81	43.2
CDX78534	Canola	extracellular	41.58	42.71
Solyc01g087590.2.1	Tomato	vacuole	43.0	42.66
PGSC0003DMT400017667	Potato	vacuole	42.6	42.42
KRH69303	Soybean	vacuole	30.02	38.44
TraesCS2B01G579100.1	Wheat	plastid	22.72	22.86
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	22.11	22.52
TraesCS3B01G280200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	21.91	21.3
TraesCS2B01G579000.1	Wheat	peroxisome	21.3	19.96
TraesCS7B01G206700.1	Wheat	cytosol, nucleus, plasma membrane, plastid	24.75	16.05
TraesCS6B01G348300.1	Wheat	nucleus	24.75	14.79
TraesCS2B01G425100.1	Wheat	plastid	24.14	14.75
TraesCS6B01G449900.1	Wheat	nucleus	24.95	6.66

Protein Annotations

EnsemblPlants:TraesCS4B01G265900.1	EnsemblPlantsGene:TraesCS4B01G265900	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF313	PFAM:PF01593	PRINTS:PR00757
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51905	SUPFAM:SSF54373	MapMan:8.5.2.1	:

Description

No Description!

Coordinates

chr4B:-:537367569..537371970

Molecular Weight (calculated)

55338.0 Da

IEP (calculated)

7.804

GRAVY (calculated)

-0.330

Length

493 amino acids

Sequence
(BLAST)

001: MTPTIATALV LALTLAHHAS LAAAAGPRVI IVGAGMSGIS AGKRLSEAGI TDLVILEATD HVGGRMRKHN FGGVSVEIGA NWVEGVNGGK MNPIWPLVNS
101: TLKLRNFRSD FDGLAENVYK EKGGIYGRAY VQKRLDRLDE VEEGGAKLPA KLRPSGQDDM SILAMQRLNN HMPNGPASPV DMILDYFKHD YEFAEPPRVT
201: SLQNVVPLAT FRDFGDDVYF VADQRGYEAV VHHLAGQYLK ADKSGDIVDP RLQLNKAQKE ISHSGSGVAV KTEEKKVYKA DYVMVSTSVG VLQSDLIQFK
301: PRLPAWKILS IYQFDMAVYT KIFVKFPRKF WPEGKGREFF LYASSRRGYY GVWQEFEAQY PDANVLLVTV TDEESRRIEQ QSDNQTKAEI VEVLRSMFPG
401: EDVPDATDIL VPRWWSNRFY RGTFSNWPIG VNRYEYDQLR SPVGRVYFTG EHTSEHYNGY VHGAYLSGID SADILIKCAQ KRMCKYHIPG KFD

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.