Factsheet for VIT_01s0127g00800.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

cytosol 1
plastid 2
peroxisome 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
ChloroP:	plastid
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0127g00770.t01	Wine grape	cytosol	13.74	74.73
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	73.13	71.68
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	37.98	69.12
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	66.67	67.48
HORVU7Hr1G118240.1	Barley	endoplasmic reticulum, golgi, vacuole	65.05	65.05
Zm00001d024281_P001	Maize	extracellular	65.25	64.6
TraesCS7B01G461800.1	Wheat	plasma membrane, vacuole	64.44	64.44
HORVU7Hr1G118260.1	Barley	plasma membrane, vacuole	64.24	63.86
GSMUA_Achr5P08640_001	Banana	cytosol, nucleus, peroxisome	57.98	63.5
TraesCS7D01G524900.1	Wheat	plasma membrane	63.84	63.45
HORVU6Hr1G091060.1	Barley	cytosol	54.34	61.84
HORVU6Hr1G042330.1	Barley	cytosol	46.67	61.76
Os09t0368200-00	Rice	golgi, vacuole	61.82	61.69
TraesCS4B01G265900.1	Wheat	vacuole	61.41	61.66
Os09t0368500-01	Rice	golgi	58.79	61.39
TraesCS4D01G265800.1	Wheat	unclear	61.01	61.26
Zm00001d028172_P001	Maize	cytosol	45.45	60.81
TraesCS5A01G549600.1	Wheat	plastid	60.81	60.81
TraesCS7A01G539200.1	Wheat	plasma membrane, vacuole	62.02	60.43
GSMUA_Achr6P24870_001	Banana	vacuole	30.91	60.24
GSMUA_Achr6P24880_001	Banana	cytosol	34.14	59.93
HORVU7Hr1G090410.1	Barley	vacuole	60.0	59.05
TraesCS4B01G385300.1	Wheat	endoplasmic reticulum	57.37	59.04
OQU80059	Sorghum	peroxisome	66.26	58.57
KXG39969	Sorghum	vacuole	60.2	58.43
TraesCS7A01G378800.1	Wheat	cytosol	53.74	58.21
TraesCS7B01G280700.1	Wheat	cytosol	55.96	58.07
TraesCS7D01G375700.1	Wheat	extracellular	58.99	58.05
GSMUA_Achr6P24900_001	Banana	vacuole	35.56	57.89
TraesCS4A01G039600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	53.74	56.84
Os03t0193400-00	Rice	nucleus, peroxisome	21.82	53.47
HORVU4Hr1G071450.1	Barley	mitochondrion	61.21	53.35
VIT_13s0064g00390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	46.46	45.73
VIT_12s0028g01120.t01	Wine grape	cytosol	24.24	24.49
VIT_04s0043g00220.t01	Wine grape	plastid	23.84	24.08
VIT_11s0016g02180.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	21.82	20.81
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	8.89	17.25
VIT_03s0017g01000.t01	Wine grape	nucleus	22.22	16.25
VIT_19s0014g03430.t01	Wine grape	cytosol	21.82	14.3
VIT_13s0019g04820.t01	Wine grape	nucleus	22.63	10.92
VIT_18s0001g13650.t01	Wine grape	nucleus	8.08	3.41
VIT_18s0001g13640.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	0.4	0.38

Protein Annotations

EntrezGene:100241347	wikigene:100241347	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.1	InterPro:Amino_oxidase
ProteinID:CBI28517	ProteinID:CBI28517.3	UniProt:D7TDE4	InterPro:FAD/NAD-bd_sf	EMBL:FN595761	InterPro:Flavin_amine_oxidase
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR036188	EntrezGene:LOC100241347	wikigene:LOC100241347	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742
PANTHER:PTHR10742:SF313	SUPFAM:SSF51905	SUPFAM:SSF54373	SignalP:SignalP-TM	TIGR:TC57461	TMHMM:TMhelix
UniParc:UPI00015CC9C6	ArrayExpress:VIT_01s0127g00800	EnsemblPlantsGene:VIT_01s0127g00800	EnsemblPlants:VIT_01s0127g00800.t01	RefSeq:XP_002267667	RefSeq:XP_002267667.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:8170622..8175373

Molecular Weight (calculated)

55225.0 Da

IEP (calculated)

6.330

GRAVY (calculated)

-0.109

Length

495 amino acids

Sequence
(BLAST)

001: MVNNKETSMV ASLLAVMAVV LSFFSIAQAA AKVPTVIVVG AGMSGISAAK TLSDAGIKNI LILEATDRIG GRIHKTNFAG LSVEMGANWV EGVGGSEMNP
101: IWEMVNKIKL KTFFSDYDNV SSNTYKQVGG LYAESVAQHL LDSLDNVVEF SENLSTLLTA KKQEDISVLT AQRLKNRVPS TPLEMAIDYY NYDYEFAEPP
201: RVTSLQNTAP LPTFANFGED LYFVGDSRGY ESVVHYVAKQ FLTTNKDGQI TDPRLLLNKA VVQITYSPSG VIIKTEDGSV YRAEYVMLSP SIGVLQSTLI
301: DFKPDLPPWK ILAIYQFDMA VYTKIFLKFP YKFWPAGNGT EFFLYAHEKR GYYTIWQQLE REYPGSNVLL VTVTDDESKR IEQQPDSDTK AEVMGVLRAM
401: FGKNIPEATD ILVPRWWSNK FYKGTFSNWP IGVSRFEFDQ IRAPVGRVYF TGEHTSQHYN GYVHGAYLAG IDSANILIPC IKKGACTYHV QPKGT

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.