Factsheet for VIT_04s0043g00220.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	42.86	82.35
Solyc03g031880.2.1	Tomato	cytosol	74.49	76.36
PGSC0003DMT400061872	Potato	cytosol	74.08	75.94
KRG98020	Soybean	cytosol	76.33	75.86
KRH20055	Soybean	cytosol	76.12	75.66
Solyc02g081390.2.1	Tomato	cytosol	75.92	75.15
PGSC0003DMT400050770	Potato	cytosol	75.71	74.95
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	71.43	70.42
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	71.43	70.42
GSMUA_Achr9P21250_001	Banana	plastid	69.8	70.23
CDY16424	Canola	cytosol, peroxisome, plastid	70.82	68.99
GSMUA_AchrUn_...	Banana	plastid	69.8	68.67
CDY54438	Canola	cytosol, peroxisome, plastid	71.22	68.43
Os04t0671300-01	Rice	peroxisome	67.76	67.48
TraesCS2A01G548100.1	Wheat	peroxisome	66.33	66.74
HORVU2Hr1G121050.1	Barley	peroxisome	66.12	65.85
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	66.12	65.85
EES13072	Sorghum	plastid	65.51	65.38
VIT_12s0028g01120.t01	Wine grape	cytosol	64.29	64.29
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	62.24	62.63
EES13070	Sorghum	cytosol, peroxisome, plastid	62.24	62.63
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	62.24	62.24
TraesCS2B01G579000.1	Wheat	peroxisome	66.73	62.17
HORVU2Hr1G121060.1	Barley	plastid	60.2	60.33
TraesCS2B01G579100.1	Wheat	plastid	60.2	60.2
TraesCS2A01G548200.1	Wheat	plastid	60.0	60.0
Zm00001d026586_P003	Maize	peroxisome, plastid	64.49	59.74
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	60.41	54.81
VIT_01s0127g00770.t01	Wine grape	cytosol	5.31	28.57
VIT_13s0064g00390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	24.69	24.06
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	24.08	23.84
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	23.47	23.52
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	23.06	22.38
VIT_11s0016g02180.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	22.86	21.58
VIT_03s0017g01000.t01	Wine grape	nucleus	29.18	21.12
VIT_19s0014g03430.t01	Wine grape	cytosol	28.98	18.81
VIT_13s0019g04820.t01	Wine grape	nucleus	28.37	13.55
VIT_18s0001g13650.t01	Wine grape	nucleus	11.43	4.78
VIT_18s0001g13640.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	1.02	0.95

Protein Annotations

EntrezGene:100250153	wikigene:100250153	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	InterPro:Amino_oxidase
ProteinID:CBI28628	ProteinID:CBI28628.3	UniProt:D7TDQ5	InterPro:FAD/NAD-bd_sf	EMBL:FN595763	InterPro:Flavin_amine_oxidase
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188	EntrezGene:LOC100250153	wikigene:LOC100250153
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373
TMHMM:TMhelix	UniParc:UPI0001983063	ArrayExpress:VIT_04s0043g00220	EnsemblPlantsGene:VIT_04s0043g00220	EnsemblPlants:VIT_04s0043g00220.t01	unigene:Vvi.17137
RefSeq:XP_002264892	RefSeq:XP_002264892.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4:+:13197148..13217299

Molecular Weight (calculated)

54207.4 Da

IEP (calculated)

5.964

GRAVY (calculated)

-0.009

Length

490 amino acids

Sequence
(BLAST)

001: MDSKQSLQGA FVSFIERRRR SLSSIPSVIV IGGGISGIAA AHTLHNASFQ VVLLESRDRL GGRIHTDYSL GCPVDMGASW LHGACNENPL APLICRLGLT
101: LYRTSGDDSV LYDHDLESCT LFDMDGHQVP QKMVVEVGET FKKILKETEN VRIEHCDDMS VLQAISIVLD RHPELRQEGL ANEVLQWYIC RMEAWFAVDA
201: DMISLKSWDQ EHILSGGHGL MVQGYDPIIK TLSKDLDIRL NHRVTNISYG CKKVVVTVEG GRNFVADAAI ITVPIGILKA NLIEFKPKLP DWKVNAISDI
301: GVGNENKIAL RFDDVFWPNV ELLGIVAPTS YACGYFLNLH KATGYPILVY MTAGSSACGL EKLSDECAVN FVMLQLKKMF PDATKPVQYL VSRWGTDPNS
401: LGCYAHDVVG KPEDSYERLL EPLDNLFFGG EAVSLDHQGS VHGAYSAGIM AAENCQRYIL ERRGNLEKLQ LVSLRSAIHE AAVPLQISRM

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.