Factsheet for TraesCS2D01G549200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G121050.1	Barley	peroxisome	99.39	99.39
TraesCS2A01G548100.1	Wheat	peroxisome	97.76	98.77
Os04t0671300-01	Rice	peroxisome	92.89	92.89
TraesCS2B01G579000.1	Wheat	peroxisome	98.98	92.59
EES13072	Sorghum	plastid	90.24	90.43
Zm00001d026586_P003	Maize	peroxisome, plastid	88.01	81.85
GSMUA_AchrUn_...	Banana	plastid	77.64	76.71
GSMUA_Achr9P21250_001	Banana	plastid	75.41	76.18
Solyc03g031880.2.1	Tomato	cytosol	67.48	69.46
PGSC0003DMT400061872	Potato	cytosol	67.07	69.04
KRG98020	Soybean	cytosol	67.68	67.55
KRH20055	Soybean	cytosol	67.48	67.34
Solyc02g081390.2.1	Tomato	cytosol	67.28	66.87
PGSC0003DMT400050770	Potato	cytosol	67.07	66.67
VIT_04s0043g00220.t01	Wine grape	plastid	65.85	66.12
KRH72905	Soybean	peroxisome	65.85	65.59
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	71.14	64.81
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	64.63	64.37
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	62.4	61.77
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	61.38	60.76
CDY16424	Canola	cytosol, peroxisome, plastid	60.98	59.64
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	30.49	58.82
CDY54438	Canola	cytosol, peroxisome, plastid	60.98	58.82
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	57.72	58.68
TraesCS4D01G265800.1	Wheat	unclear	22.36	22.31
TraesCS7D01G524900.1	Wheat	plasma membrane	22.56	22.29
TraesCS7D01G375700.1	Wheat	extracellular	22.56	22.07
TraesCS3D01G251100.1	Wheat	golgi	21.75	21.79
TraesCS7D01G303200.1	Wheat	cytosol, nucleus, plasma membrane, plastid	31.71	20.55
TraesCS2D01G404400.1	Wheat	plastid	31.71	18.64
TraesCS6D01G297500.1	Wheat	plastid	30.89	17.33
TraesCS6D01G389200.1	Wheat	nucleus	33.94	9.02

Protein Annotations

EnsemblPlants:TraesCS2D01G549200.1	EnsemblPlantsGene:TraesCS2D01G549200	Gene3D:3.50.50.60	Gene3D:3.90.660.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	InterPro:IPR036188	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	PFAM:PF01593	PRINTS:PR00757
SEG:seg	SUPFAM:SSF51905	SUPFAM:SSF54373	MapMan:8.5.2.2	:	:

Description

No Description!

Coordinates

chr2D:+:624662483..624666593

Molecular Weight (calculated)

54376.5 Da

IEP (calculated)

5.603

GRAVY (calculated)

-0.008

Length

492 amino acids

Sequence
(BLAST)

001: MDQPPNGFAA GGLFVQHIDG QKASPPSVIV IGGGISGIAS ARALSNASFK VTLLESRERL GGRVHTDYSF GCPIDMGASW LHGVCNENSL APLIRLLGLR
101: LYRTSGDNSV LYDHDLESYA LFDKDGRQIP QEIVTKVGEI FEQILKETVK VRDEYANDMP LVQAISMVLD RNPHLKLEGL QYEVLQWCIC RLEAWFATDV
201: DNISLKNWDQ EHVLTGGHGL MVNGYDPVIK ALSRDLDVHL NHRVTKIIQR YNKVIVCVED GTSFVADAAI ITVPLGVLKA NIIKFEPELP DWKLSAISDL
301: GVGLENKIAL RFNTIFWPNV EVLGRVAQTS NACGYFLNLH KATGHPVLVC MVAGRFAYEM EKLSDEESVN FVMSQLRRML PGATEPVQYL VSRWGTDPNS
401: LGSYSCDLVG KPADLYERFC ARVGNLFFAG EAACIDHSGS VHGAYSSGID AAEDCRRRLS TQLGISDLFQ VGKIVMREEM TEVMVPLQIS RL

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.