CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0671300-01	Rice	peroxisome	91.45	91.26
HORVU2Hr1G121050.1	Barley	peroxisome	90.63	90.45
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	90.43	90.24
TraesCS2A01G548100.1	Wheat	peroxisome	89.21	89.94
Zm00001d026586_P003	Maize	peroxisome, plastid	94.5	87.71
TraesCS2B01G579000.1	Wheat	peroxisome	90.83	84.79
EES13070	Sorghum	cytosol, peroxisome, plastid	74.95	75.56
GSMUA_AchrUn_...	Banana	plastid	76.37	75.3
GSMUA_Achr9P21250_001	Banana	plastid	73.32	73.92
Solyc03g031880.2.1	Tomato	cytosol	66.8	68.62
PGSC0003DMT400061872	Potato	cytosol	66.4	68.2
KRG98020	Soybean	cytosol	68.02	67.75
KRH20055	Soybean	cytosol	67.41	67.14
PGSC0003DMT400050770	Potato	cytosol	67.21	66.67
Solyc02g081390.2.1	Tomato	cytosol	67.01	66.46
KRH72905	Soybean	peroxisome	66.19	65.79
VIT_04s0043g00220.t01	Wine grape	plastid	65.38	65.51
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	65.38	64.98
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	61.51	60.76
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	60.69	59.96
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	58.66	59.63
CDY16424	Canola	cytosol, peroxisome, plastid	60.29	58.85
CDY54438	Canola	cytosol, peroxisome, plastid	60.29	58.04
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	30.14	58.04
KXG39969	Sorghum	vacuole	24.64	23.73
EES03507	Sorghum	mitochondrion	23.63	22.52
OQU80059	Sorghum	peroxisome	25.25	22.14
EES14528	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	31.36	20.24
EES12649	Sorghum	plastid	32.59	19.8
OQU85392	Sorghum	nucleus	30.14	17.41
EER94594	Sorghum	nucleus	34.22	9.34

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	EntrezGene:8082590	InterPro:Amino_oxidase	UniProt:C5YA49
EnsemblPlants:EES13072	ProteinID:EES13072	ProteinID:EES13072.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	EnsemblPlantsGene:SORBI_3006G261600	SUPFAM:SSF51905
SUPFAM:SSF54373	unigene:Sbi.1316	UniParc:UPI0001A875A2	RefSeq:XP_002448744.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:59644857..59649073

Molecular Weight (calculated)

54028.1 Da

IEP (calculated)

6.024

GRAVY (calculated)

-0.002

Length

491 amino acids

Sequence
(BLAST)

001: MDQPPNGFAA GGFFTHIDGQ NRSPPSVIVI GGGISGIAAA RALSNASFKV TLLESRDRVG GRVHTDYSFG CPIDMGASWL HGVCNENSLA PLIRMLGLRL
101: YRTSGDNSVL YDHDLESYAL FDKHGQQVPQ EIVSKVGETF EKILKETVKV RDEHANDMPL IQAMAIVLNR NPHMKLEGLE YEVLQWCICR LEAWFATDMD
201: NISLKNWDQE HVLTGGHGLM VNGYDPVIKA LAQGLDIHLN HRVTKIIQRY NKVIVCVEDG ASFVADAAII TVPLGVLKAN IIKFEPELPR EKLSAIADLG
301: VGIENKIALK FNTVFWPNVE VLGRIAPTSN ACGYFLNLHK ATGNPVLVCM VAGRFAYEIE KLSDEESVNF VMSQLRKMLP QATEPVQYLV SRWGSDPNSL
401: GSYSCDLVGK PADLYERFCA PVGNLFFAGE AACIDHSGSV HGAYSSGIAA AEDCRRRLST QLGISDLFQV AKVVMREEMN EVMVPFQISR L

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.