Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039742.1-P | Field mustard | cytosol, peroxisome, plastid | 93.96 | 93.96 |
| CDY16424 | Canola | cytosol, peroxisome, plastid | 93.36 | 92.25 |
| CDY54438 | Canola | cytosol, peroxisome, plastid | 93.36 | 90.98 |
| VIT_04s0043g00220.t01 | Wine grape | plastid | 70.42 | 71.43 |
| KRG98020 | Soybean | cytosol | 69.22 | 69.78 |
| Solyc03g031880.2.1 | Tomato | cytosol | 66.8 | 69.46 |
| KRH20055 | Soybean | cytosol | 68.81 | 69.37 |
| PGSC0003DMT400061872 | Potato | cytosol | 66.6 | 69.25 |
| PGSC0003DMT400050770 | Potato | cytosol | 68.01 | 68.28 |
| Solyc02g081390.2.1 | Tomato | cytosol | 67.81 | 68.08 |
| KRH17261 | Soybean | cytosol, peroxisome, plasma membrane | 66.8 | 67.21 |
| KRH72905 | Soybean | peroxisome | 66.6 | 67.0 |
| GSMUA_Achr9P21250_001 | Banana | plastid | 63.38 | 64.68 |
| GSMUA_AchrUn_... | Banana | plastid | 63.58 | 63.45 |
| TraesCS2A01G548100.1 | Wheat | peroxisome | 62.17 | 63.45 |
| HORVU2Hr1G121050.1 | Barley | peroxisome | 62.17 | 62.8 |
| Os04t0671300-01 | Rice | peroxisome | 61.97 | 62.6 |
| TraesCS2D01G549200.1 | Wheat | peroxisome, plastid | 61.77 | 62.4 |
| EES13072 | Sorghum | plastid | 60.76 | 61.51 |
| AT3G59050.1 | Thale cress | cytosol, nucleus, peroxisome | 59.56 | 60.66 |
| AT2G43020.1 | Thale cress | peroxisome | 59.56 | 60.41 |
| VIT_17s0053g00880.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 30.99 | 60.39 |
| EES13070 | Sorghum | cytosol, peroxisome, plastid | 59.15 | 60.37 |
| Zm00001d001883_P008 | Maize | cytosol, peroxisome, plastid | 59.15 | 60.0 |
| Os04t0671200-01 | Rice | cytosol, peroxisome, plastid | 58.15 | 59.34 |
| TraesCS2B01G579000.1 | Wheat | peroxisome | 62.17 | 58.75 |
| TraesCS2B01G579100.1 | Wheat | plastid | 56.94 | 57.76 |
| HORVU2Hr1G121060.1 | Barley | plastid | 56.74 | 57.67 |
| TraesCS2A01G548200.1 | Wheat | plastid | 56.74 | 57.55 |
| Zm00001d026586_P003 | Maize | peroxisome, plastid | 60.56 | 56.9 |
| TraesCS2D01G549300.1 | Wheat | mitochondrion, plastid | 57.14 | 52.59 |
| AT5G13700.1 | Thale cress | extracellular | 24.75 | 26.06 |
| AT4G29720.1 | Thale cress | mitochondrion | 23.14 | 21.58 |
| AT3G13682.1 | Thale cress | cytosol | 29.78 | 19.84 |
| AT1G62830.1 | Thale cress | nucleus | 29.58 | 17.42 |
| AT3G10390.3 | Thale cress | plastid | 30.18 | 16.03 |
| AT4G16310.4 | Thale cress | nucleus | 33.4 | 10.2 |
Protein Annotations
| Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | MapMan:8.5.2.2 | EntrezGene:842894 | UniProt:A0A178WKV9 | ProteinID:AAF23834.1 |
| ProteinID:AEE34430.1 | EMBL:AF364953 | EMBL:AF370508 | ArrayExpress:AT1G65840 | EnsemblPlantsGene:AT1G65840 | RefSeq:AT1G65840 |
| TAIR:AT1G65840 | RefSeq:AT1G65840-TAIR-G | EnsemblPlants:AT1G65840.1 | TAIR:AT1G65840.1 | Symbol:ATPAO4 | InterPro:Amino_oxidase |
| Unigene:At.16379 | EMBL:BT000353 | InterPro:FAD/NAD-bd_sf | InterPro:Flavin_amine_oxidase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0006598 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0046592 |
| GO:GO:0052894 | GO:GO:0052895 | GO:GO:0052901 | GO:GO:0055114 | InterPro:IPR036188 | RefSeq:NP_176759.1 |
| ProteinID:OAP18531.1 | PFAM:PF01593 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PRINTS:PR00757 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF264 | UniProt:Q8H191 | SUPFAM:SSF51905 | SUPFAM:SSF54373 |
| UniParc:UPI00000ADAC8 | : | : | : | : | : |
Description
PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
Coordinates
chr1:+:24489758..24493077
Molecular Weight (calculated)
54933.9 Da
IEP (calculated)
4.951
GRAVY (calculated)
-0.104
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.