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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039742.1-P Field mustard cytosol, peroxisome, plastid 96.27 98.79
CDY16424 Canola cytosol, peroxisome, plastid 96.27 97.61
AT1G65840.1 Thale cress cytosol, peroxisome, plastid 90.98 93.36
VIT_04s0043g00220.t01 Wine grape plastid 68.43 71.22
KRG98020 Soybean cytosol 67.65 69.98
Solyc03g031880.2.1 Tomato cytosol 65.29 69.67
KRH20055 Soybean cytosol 67.25 69.57
PGSC0003DMT400061872 Potato cytosol 65.1 69.46
PGSC0003DMT400050770 Potato cytosol 66.67 68.69
Solyc02g081390.2.1 Tomato cytosol 66.47 68.48
KRH17261 Soybean cytosol, peroxisome, plasma membrane 65.1 67.21
KRH72905 Soybean peroxisome 64.9 67.0
GSMUA_Achr9P21250_001 Banana plastid 61.76 64.68
GSMUA_AchrUn_... Banana plastid 61.37 62.85
TraesCS2A01G548100.1 Wheat peroxisome 59.22 62.01
HORVU2Hr1G121050.1 Barley peroxisome 59.22 61.38
Os04t0671300-01 Rice peroxisome 59.22 61.38
TraesCS2D01G549200.1 Wheat peroxisome, plastid 58.82 60.98
VIT_17s0053g00880.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 30.39 60.78
CDY42808 Canola peroxisome 56.86 60.42
CDY14867 Canola peroxisome 58.04 60.41
CDY55500 Canola peroxisome 58.04 60.41
EES13072 Sorghum plastid 58.04 60.29
CDY53655 Canola peroxisome 57.65 60.0
CDY30376 Canola peroxisome 57.65 60.0
CDX67773 Canola peroxisome 57.06 59.51
CDX83508 Canola peroxisome 55.88 59.38
EES13070 Sorghum cytosol, peroxisome, plastid 56.67 59.34
Zm00001d001883_P008 Maize cytosol, peroxisome, plastid 56.67 58.98
Os04t0671200-01 Rice cytosol, peroxisome, plastid 56.27 58.93
TraesCS2B01G579000.1 Wheat peroxisome 59.41 57.6
TraesCS2B01G579100.1 Wheat plastid 54.51 56.73
HORVU2Hr1G121060.1 Barley plastid 54.31 56.65
TraesCS2A01G548200.1 Wheat plastid 54.31 56.53
Zm00001d026586_P003 Maize peroxisome, plastid 57.65 55.58
CDX98346 Canola cytosol 56.47 52.46
TraesCS2D01G549300.1 Wheat mitochondrion, plastid 54.71 51.67
CDX78534 Canola extracellular 24.71 26.25
CDX70516 Canola extracellular 24.12 26.11
CDY55139 Canola endoplasmic reticulum, extracellular 27.25 23.88
CDY30206 Canola mitochondrion 22.35 22.66
CDY54281 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 21.37 22.24
CDY43522 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 21.37 21.98
CDY06780 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 21.96 20.74
CDY55136 Canola cytosol 29.22 20.38
CDY51731 Canola cytosol 28.82 20.08
CDY46926 Canola cytosol 27.06 19.77
CDY31848 Canola nucleus 27.06 19.69
CDY00667 Canola cytosol, plastid 28.82 16.08
CDX73929 Canola nucleus, plastid 28.82 15.94
CDY22771 Canola nucleus 33.33 10.78
CDY42542 Canola nucleus 33.33 10.67
Protein Annotations
Gene3D:3.50.50.60Gene3D:3.90.660.10MapMan:8.5.2.2GO:A0A078ITG3UniProt:A0A078ITG3InterPro:Amino_oxidase
EnsemblPlants:CDY54438ProteinID:CDY54438ProteinID:CDY54438.1InterPro:FAD/NAD-bd_sfInterPro:Flavin_amine_oxidaseGO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00014102001
InterPro:IPR036188PFAM:PF01593PRINTS:PR00757PANTHER:PTHR10742PANTHER:PTHR10742:SF264SUPFAM:SSF51905
SUPFAM:SSF54373UniParc:UPI0004EECD33::::
Description
BnaC02g45540DBnaC02g45540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITG3]
Coordinates
chrLK033320:-:5390..8389
Molecular Weight (calculated)
56424.8 Da
IEP (calculated)
4.731
GRAVY (calculated)
-0.002
Length
510 amino acids
Sequence
(BLAST)
001: MDKKISFTDE LPDGTISALL QKQNNVVQPC VIVIGSGISG LAAARSLSEA SFNVIVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSND NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLYDMHGN KIPPLLVTQV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRHPELRQ EGIAYEVLQW YICRMEAWFA
201: VDANLISLKC WDQASEPILL FLIVVQDECL SGGHGLMVQG YEPVIRTIAK DIDIRLNHRV TKVSRTSNNK VIVEVEGGTN FVADAVIITV PIGVLKANLI
301: QFEPELPQWK TSAISDLGVG NENKIALRFE NVFWPNVEFL GMVAPTPYSC GYFLNLHKAT GHPVLVYMAA GNLAKDLEKL SDEATANFVM LQLKKMFPDA
401: PDPAQYLVTR WGTDPDTLGC YAYDVVGMPE DLYARLGEPV DNIFFGGEAV NVEHQGSAHG AFLAGVSASQ NCQRYIFERL GAWEKLKLVS LMRNSDILET
501: GTVPLQISRM
Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)
001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM
Arabidopsis Description
PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.