Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040571.1-P | Field mustard | nucleus | 98.6 | 98.48 |
| CDY42542 | Canola | nucleus | 97.72 | 96.74 |
| AT4G16310.4 | Thale cress | nucleus | 82.31 | 79.73 |
| PGSC0003DMT400009649 | Potato | cytosol | 44.2 | 53.78 |
| GSMUA_Achr2P09900_001 | Banana | cytosol | 44.51 | 49.61 |
| Os10t0532150-00 | Rice | cytosol, nucleus, plastid | 7.1 | 45.16 |
| KRH17390 | Soybean | nucleus | 52.31 | 43.56 |
| KRH05909 | Soybean | nucleus | 51.74 | 42.79 |
| Solyc04g081100.2.1 | Tomato | nucleus | 51.05 | 38.74 |
| EER94594 | Sorghum | nucleus | 44.07 | 38.63 |
| TraesCS6B01G449900.1 | Wheat | nucleus | 44.71 | 38.19 |
| Zm00001d029714_P001 | Maize | extracellular | 43.88 | 38.15 |
| TraesCS6D01G389200.1 | Wheat | nucleus | 44.71 | 38.07 |
| TraesCS6A01G405500.2 | Wheat | nucleus | 44.71 | 38.07 |
| Os10t0532100-01 | Rice | nucleus | 29.11 | 38.0 |
| HORVU6Hr1G092910.1 | Barley | nucleus | 42.99 | 37.29 |
| CDY42808 | Canola | peroxisome | 10.78 | 35.42 |
| CDX83508 | Canola | peroxisome | 10.72 | 35.21 |
| CDY55139 | Canola | endoplasmic reticulum, extracellular | 12.94 | 35.05 |
| CDY55500 | Canola | peroxisome | 10.78 | 34.69 |
| CDY14867 | Canola | peroxisome | 10.72 | 34.49 |
| CDY30376 | Canola | peroxisome | 10.65 | 34.29 |
| CDY53655 | Canola | peroxisome | 10.65 | 34.29 |
| CDX67773 | Canola | peroxisome | 10.46 | 33.74 |
| CDY55136 | Canola | cytosol | 15.6 | 33.65 |
| CDY16424 | Canola | cytosol, peroxisome, plastid | 10.72 | 33.6 |
| CDY51731 | Canola | cytosol | 15.54 | 33.47 |
| CDY54438 | Canola | cytosol, peroxisome, plastid | 10.78 | 33.33 |
| CDY46926 | Canola | cytosol | 13.82 | 31.23 |
| CDY31848 | Canola | nucleus | 13.82 | 31.1 |
| CDX98346 | Canola | cytosol | 10.72 | 30.78 |
| CDY00667 | Canola | cytosol, plastid | 16.11 | 27.79 |
| CDX73929 | Canola | nucleus, plastid | 16.04 | 27.44 |
| CDY54281 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 8.24 | 26.53 |
| CDY30206 | Canola | mitochondrion | 8.24 | 25.84 |
| CDY43522 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 7.86 | 25.0 |
| CDY06780 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 8.24 | 24.07 |
| CDX70516 | Canola | extracellular | 6.79 | 22.72 |
| CDX78534 | Canola | extracellular | 6.91 | 22.71 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.2 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | GO:A0A078GBL3 | UniProt:A0A078GBL3 |
| InterPro:Amino_oxidase | EnsemblPlants:CDY22771 | ProteinID:CDY22771 | ProteinID:CDY22771.1 | ncoils:Coil | InterPro:FAD/NAD-bd_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00021096001 | InterPro:Homeobox-like_sf |
| InterPro:IPR007526 | InterPro:IPR035441 | InterPro:IPR036188 | InterPro:IPR036388 | PFAM:PF01593 | PFAM:PF04433 |
| PRINTS:PR00419 | PFscan:PS50934 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF354 | SUPFAM:SSF46689 | SUPFAM:SSF47676 |
| SUPFAM:SSF51905 | SUPFAM:SSF54373 | InterPro:SWIRM | InterPro:TFIIS/LEDGF_dom_sf | UniParc:UPI0004EE3713 | InterPro:WH-like_DNA-bd_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g06010DBnaA08g06010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBL3]
Coordinates
chrLK032135:-:503845..510604
Molecular Weight (calculated)
173765.0 Da
IEP (calculated)
6.753
GRAVY (calculated)
-0.494
Length
1577 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDGKGKRCGS KKESKVFDFE DDADDDEPIG SLLKVMKHKT ATKSKVETET TGKQMKKLTH VRKDSEDMDD TLASFRKRLK GHKKRVRNDK DVPPVDTVTL
0101: IPSPDMADDA SELGREGTVN RKSLDDIYKS KVKSSTRSVI LEKEADADDK SKRPLPNVDV YPPVDRKDVS VLSPDHHIHL GEPESESGHF REEKIVMCEC
0201: GIQFNFEDRS LESNSEVAIC QKCKRSSHRD ASNGGGIQVN ALKDGTAEAS PVSVTPYEDE DFRGDAVSLP NSGKPSTLQR PERIARKRKH ENMVYGEDMN
0301: WENEQGFLDC QSDKSFKGSD KCDFGPFISK EIEIGRAAAV AAGLKAQSVS PVEKTILKEV LKRKGSHQEY LRCRNSILGL WSKNVSRILP VTECVVGLSE
0401: SEFPSAYLIR EVYKFLDQRG YINTGVSSVR GKGGPSINHD DDLSQGKKLE ESYMASVAYS EGDTFIFGQV KAVESTSEGK NCALQNDETE IVGCATSAML
0501: GSTSKACEAS IIEDCKHSVS INGLPPDANA PKVEKCPETV SVPKTALSST PSSANCNQIS GRDCVQCEVE DEKKVIVIGA GPAGLTAARH LQRQGFSVTV
0601: LEARSRVGGR VFTDRSSLSV PVDLGASIIT GIEADVPSER MPDPSALVCN QLGLELSVLH GFCPLYDTVT GEKVPPELDD ALQGEFNSLI DDMDLLVEEI
0701: GKDRANKMSL EDGLEYGLQR LRMPHEKVNI ERFGIGNSIN GSFSRTGITG TFKHDGRLKK DFLNPLERRV MNWHFAHTEY GCAAVLKEVS LSNWNQDEFY
0801: GGFGGPHAMI KGGYSRVAES LAEGLDIRLN NVVSEVSYTS DVSAMHNNKH KVIVSTSNGG EYLGDAVLVT VPLGCLKAET IKFSPPLPDW KYSSIKQLGF
0901: GVLNKVVLEF SKVFWDDSLD YFGATAEETD QRGECFMFWN VKKTVGAPVL IALVVGKAAV DYKDKSKSEH VNHAMMVLRK LFGGDLVPDP VASVVTDWGA
1001: DPYSYGAYSY VAIGASGEDY DVLGRPVQNC LFFAGEATCK EHPDTVGGAM MTGVREAVRI IDILRSGNDY TAEIETLEKA QRKSVSIRDE VSDLIKRLEV
1101: VELSNVLARH SLLRNMFFSA KTTVGRLHLA KELLNLPGET LKSFAGTKEG LTVLNSWILD SMGKNGTQLL RHCVHILVRV TSDLFAVRLS GIGKTVKEKV
1201: CAHTSRDIRA IASQLVNVWL ELYRKEKANR EMKSLRRTNP TNISRIRRKQ NSEDADSKGN LSNGNDTTTD GEIEDNQLPM SEEEKAVFAT AEAARVAAEA
1301: AAKANVSAYQ STSLQLPKIP SFHKFARREQ YAKMDESDFK KKFPGNVLGR QDCMSEIDSR NCKVRDWYDF PASCLDPDSS RVQVDNCSQR SHSNELGSHS
1401: KFRECSRESG AAETSVFTGA WVDTGGSSDG GKDYKAIDRW QSQAAAADPE FFNRALHMKD EEGSMACSTG PPSSMSQVTV NKEPRKSHIR GADRLKQGVV
1501: DFVASLLMTP YRAKKIDRDV YKSIMKKTAT KVMQQTTDAE KAMAVPQFLD SKRKNKIRDF VDKQVDKYIA MAKVAKP
0101: IPSPDMADDA SELGREGTVN RKSLDDIYKS KVKSSTRSVI LEKEADADDK SKRPLPNVDV YPPVDRKDVS VLSPDHHIHL GEPESESGHF REEKIVMCEC
0201: GIQFNFEDRS LESNSEVAIC QKCKRSSHRD ASNGGGIQVN ALKDGTAEAS PVSVTPYEDE DFRGDAVSLP NSGKPSTLQR PERIARKRKH ENMVYGEDMN
0301: WENEQGFLDC QSDKSFKGSD KCDFGPFISK EIEIGRAAAV AAGLKAQSVS PVEKTILKEV LKRKGSHQEY LRCRNSILGL WSKNVSRILP VTECVVGLSE
0401: SEFPSAYLIR EVYKFLDQRG YINTGVSSVR GKGGPSINHD DDLSQGKKLE ESYMASVAYS EGDTFIFGQV KAVESTSEGK NCALQNDETE IVGCATSAML
0501: GSTSKACEAS IIEDCKHSVS INGLPPDANA PKVEKCPETV SVPKTALSST PSSANCNQIS GRDCVQCEVE DEKKVIVIGA GPAGLTAARH LQRQGFSVTV
0601: LEARSRVGGR VFTDRSSLSV PVDLGASIIT GIEADVPSER MPDPSALVCN QLGLELSVLH GFCPLYDTVT GEKVPPELDD ALQGEFNSLI DDMDLLVEEI
0701: GKDRANKMSL EDGLEYGLQR LRMPHEKVNI ERFGIGNSIN GSFSRTGITG TFKHDGRLKK DFLNPLERRV MNWHFAHTEY GCAAVLKEVS LSNWNQDEFY
0801: GGFGGPHAMI KGGYSRVAES LAEGLDIRLN NVVSEVSYTS DVSAMHNNKH KVIVSTSNGG EYLGDAVLVT VPLGCLKAET IKFSPPLPDW KYSSIKQLGF
0901: GVLNKVVLEF SKVFWDDSLD YFGATAEETD QRGECFMFWN VKKTVGAPVL IALVVGKAAV DYKDKSKSEH VNHAMMVLRK LFGGDLVPDP VASVVTDWGA
1001: DPYSYGAYSY VAIGASGEDY DVLGRPVQNC LFFAGEATCK EHPDTVGGAM MTGVREAVRI IDILRSGNDY TAEIETLEKA QRKSVSIRDE VSDLIKRLEV
1101: VELSNVLARH SLLRNMFFSA KTTVGRLHLA KELLNLPGET LKSFAGTKEG LTVLNSWILD SMGKNGTQLL RHCVHILVRV TSDLFAVRLS GIGKTVKEKV
1201: CAHTSRDIRA IASQLVNVWL ELYRKEKANR EMKSLRRTNP TNISRIRRKQ NSEDADSKGN LSNGNDTTTD GEIEDNQLPM SEEEKAVFAT AEAARVAAEA
1301: AAKANVSAYQ STSLQLPKIP SFHKFARREQ YAKMDESDFK KKFPGNVLGR QDCMSEIDSR NCKVRDWYDF PASCLDPDSS RVQVDNCSQR SHSNELGSHS
1401: KFRECSRESG AAETSVFTGA WVDTGGSSDG GKDYKAIDRW QSQAAAADPE FFNRALHMKD EEGSMACSTG PPSSMSQVTV NKEPRKSHIR GADRLKQGVV
1501: DFVASLLMTP YRAKKIDRDV YKSIMKKTAT KVMQQTTDAE KAMAVPQFLD SKRKNKIRDF VDKQVDKYIA MAKVAKP
0001: MDGKEKKSGS KRGSKVFQFD DDADDDEPIG SLLEIMKHKS SKKDKVETES TGKQRQKQVV EKKLSALGKD SEDMDDTLAS FRKRLKGNKK GVESGTSRVR
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
Arabidopsis Description
LDL3Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.