CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, mitochondrion, plasma membrane, golgi

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, secretory
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30206	Canola	mitochondrion	92.04	89.66
CDY43522	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	81.63	80.65
CDY06780	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	84.69	76.85
AT4G29720.1	Thale cress	mitochondrion	83.47	76.74
VIT_11s0016g02180.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	62.04	58.57
Solyc05g018880.1.1	Tomato	endoplasmic reticulum	59.39	56.84
PGSC0003DMT400055123	Potato	cytosol	60.0	56.54
KRH02713	Soybean	golgi	60.41	55.85
Solyc07g039310.1.1	Tomato	golgi	58.16	55.56
PGSC0003DMT400045965	Potato	endoplasmic reticulum	58.57	55.19
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.0	54.65
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	62.65	52.84
KRH37387	Soybean	golgi	62.04	50.67
GSMUA_Achr4P15860_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.24	50.24
PGSC0003DMT400094539	Potato	golgi	54.69	49.63
Solyc03g007160.1.1	Tomato	plasma membrane, vacuole	18.57	49.19
GSMUA_Achr3P32350_001	Banana	mitochondrion	50.41	48.81
TraesCS3D01G251100.1	Wheat	golgi	46.33	46.23
TraesCS3B01G280200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	47.14	45.56
Os01t0710200-01	Rice	mitochondrion	46.73	44.73
HORVU3Hr1G066920.4	Barley	extracellular	46.94	44.57
EES03507	Sorghum	mitochondrion	46.73	44.47
TraesCS3A01G250700.1	Wheat	mitochondrion	45.92	44.12
Zm00001d043681_P001	Maize	mitochondrion	44.9	43.65
Solyc12g008850.1.1	Tomato	cytosol	52.24	38.1
PGSC0003DMT400000891	Potato	endoplasmic reticulum	52.45	32.08
CDY42808	Canola	peroxisome	22.45	22.92
CDX83508	Canola	peroxisome	22.45	22.92
CDY55139	Canola	endoplasmic reticulum, extracellular	26.53	22.34
CDY55500	Canola	peroxisome	22.24	22.24
CDX67773	Canola	peroxisome	22.04	22.09
CDY53655	Canola	peroxisome	22.04	22.04
CDY16424	Canola	cytosol, peroxisome, plastid	22.45	21.87
CDX70516	Canola	extracellular	20.82	21.66
CDY30376	Canola	peroxisome	21.63	21.63
CDY14867	Canola	peroxisome	21.63	21.63
CDY54438	Canola	cytosol, peroxisome, plastid	22.24	21.37
CDX78534	Canola	extracellular	20.82	21.25
CDX98346	Canola	cytosol	21.84	19.49
CDY46926	Canola	cytosol	26.33	18.48
CDY31848	Canola	nucleus	26.33	18.4
CDY55136	Canola	cytosol	26.53	17.78
CDY51731	Canola	cytosol	26.53	17.76
CDX73929	Canola	nucleus, plastid	27.76	14.75
CDY00667	Canola	cytosol, plastid	27.35	14.66
CDY22771	Canola	nucleus	26.53	8.24
CDY42542	Canola	nucleus	26.53	8.16

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.3	GO:A0A078IW94	UniProt:A0A078IW94	InterPro:Amino_oxidase
EnsemblPlants:CDY54281	ProteinID:CDY54281	ProteinID:CDY54281.1	InterPro:FAD/NAD-bd_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00013759001	InterPro:IPR036188
PFAM:PF01593	PANTHER:PTHR10742	PANTHER:PTHR10742:SF320	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0004EE2C4D

Description

BnaC07g50830DBnaC07g50830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW94]

Coordinates

chrLK033298:-:48395..50080

Molecular Weight (calculated)

53580.3 Da

IEP (calculated)

5.079

GRAVY (calculated)

-0.261

Length

490 amino acids

Sequence
(BLAST)

001: MTKKPRIVII GAGMAGLTAA NKLYTHSNNN TFDLSVVEGG SRIGGRINTS EFSSEKIEMG ATWIHGIGGS PVYKIAEEAG SLVSDEPWEC MDSTADKART
101: FAEGGFEVDP SVVEPISGLF NALMELAQRK KKMKEITQND VVSGSGGIYG NATTAYRDAT GNGSLEEAIF TMFSNTQRTY TSADDLSTLD YAAESEYQMF
201: PGEEITIAKG YVSVIHHLAS VLPQGVIQLN RTVAKIEWES CEECPVKLHF SDGSVVFADH VIVTVSLGVL KAGIESDDEG GLFSPPLPEF KSDAIKRLGY
301: GVVNKLFVEV SERNFPSLQL VFDREDSDSR FVKIPWWMRR TATIAPIHSN SKVLLSWFAG KEAIELEKLT DEEIIDGVLT TISCLTGKQV KKDTDTKPPL
401: WGGDPLFRGS YSYVAVGASG DDLDALAEPL PKINKKGGEG NCHDQTKVHE LQVMFAGEAT HRTHYSTTHG AYYSGLREAN RLLKHYKCDF

Best Arabidopsis Sequence Match ( AT4G29720.1 )
(BLAST)

001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF

Arabidopsis Description

PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.