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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400000891 Potato endoplasmic reticulum 90.92 76.28
Solyc03g007160.1.1 Tomato plasma membrane, vacuole 17.86 64.86
Solyc05g018880.1.1 Tomato endoplasmic reticulum 48.21 63.28
Solyc07g039310.1.1 Tomato golgi 45.24 59.26
VIT_11s0016g02180.t01 Wine grape endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 45.09 58.38
KRH02713 Soybean golgi 45.98 58.3
KRH19156 Soybean endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 45.98 57.43
KRH12386 Soybean endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 46.88 54.22
CDY43522 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 39.58 53.63
KRH37387 Soybean golgi 47.47 53.17
CDY54281 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 38.1 52.24
CDY30206 Canola mitochondrion 38.54 51.49
AT4G29720.1 Thale cress mitochondrion 40.77 51.41
CDY06780 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 40.92 50.93
Bra024137.1-P Field mustard mitochondrion 38.84 50.68
Bra011132.1-P Field mustard endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 40.48 50.28
GSMUA_Achr4P15860_001 Banana endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 30.36 49.51
GSMUA_Achr3P32350_001 Banana mitochondrion 33.78 44.86
TraesCS3B01G280200.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 32.89 43.59
TraesCS3D01G251100.1 Wheat golgi 31.25 42.77
HORVU3Hr1G066920.4 Barley extracellular 32.59 42.44
TraesCS3A01G250700.1 Wheat mitochondrion 32.14 42.35
Os01t0710200-01 Rice mitochondrion 32.14 42.19
Zm00001d043681_P001 Maize mitochondrion 31.4 41.87
EES03507 Sorghum mitochondrion 31.99 41.75
Solyc12g006370.1.1 Tomato plastid 17.86 24.59
Solyc07g043590.2.1 Tomato cytosol, mitochondrion, peroxisome, plastid 17.56 24.08
Solyc02g033080.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 12.35 23.92
Solyc03g031880.2.1 Tomato cytosol 16.52 23.22
Solyc02g081390.2.1 Tomato cytosol 16.07 21.82
Solyc01g087590.2.1 Tomato vacuole 15.33 20.72
Solyc05g055590.1.1 Tomato cytosol 18.75 19.84
Solyc07g063500.2.1 Tomato cytosol, mitochondrion, nucleus 20.09 17.88
Solyc05g055580.1.1 Tomato cytosol, peroxisome, plastid 13.69 15.86
Solyc07g063450.1.1 Tomato cytosol 19.64 14.43
Solyc11g008320.1.1 Tomato nucleus 19.49 13.05
Solyc04g081100.2.1 Tomato nucleus 20.09 6.5
Protein Annotations
EnsemblPlants:Solyc12g008850.1.1EnsemblPlantsGene:Solyc12g008850.1Gene3D:3.50.50.60Gene3D:3.90.660.10GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:Amino_oxidaseInterPro:FAD/NAD-bd_sf
InterPro:IPR036188PANTHER:PTHR10742PANTHER:PTHR10742:SF320PFAM:PF01593SEG:segSUPFAM:SSF51905
SUPFAM:SSF54373UniParc:UPI00027696D3UniProt:K4DBX3MapMan:8.5.2.3::
Description
No Description!
Coordinates
chr12:+:2192162..2194180
Molecular Weight (calculated)
74816.1 Da
IEP (calculated)
4.324
GRAVY (calculated)
-0.502
Length
672 amino acids
Sequence
(BLAST)
001: MVSQKPKIVI IGAGIAGLTA AKKLYTTQNT NELFEVCVVE GGNRIGGRIF TTEFCGDRVE MGATWIHGIE GNPIYKIAQE INGFETDKPW DSMGGKVDKK
101: LTITEEGHEV HSSFVNSISN FFNNLLEFSS GEGDFDGGVG RKIVESLNLE ENGRVDKISM GSYLRKGLEF YWGLKKDQGN VESLNLENDQ ENVESFNLED
201: GGIEKEQENV ESFNLESGGV ENDQEKVEGF NLEHAGTEKD QENVESFNLG HVGIEKDQEN VESFNLDDDD VEEDQENVES FNLDDGGVEK DQENVESFNL
301: DDGGVEKDQE NVESFNLDSG STEKDGENVE VFENWSRKAL EEGIFAMFEN IHRHYSSAGD LGTLDFNGES EYCNFPGDEI TIAKGYSSIV ESLASVLPPG
401: LIQLGRKVSK IEWQLETSDG NKPVKLHFSD GSVMYADHVI VTVSLGVLKQ GIREDSSLFS PPLPKFKTEA ISRLGFGVVD KVFLQLTPTH HDGMNFPNMM
501: MVFHQSNAKL KNPKIPLWIR RTTLTHPVYP ESRVVVSWFA GEEALKVETL DDDEIIEGVS ITMSEFLSNT KHYKNSIKFS KVLKCKWGTD PLFLGSYTHI
601: AVGSSGDDLD AMAEPLPKEI SDDKNSKKSP RLQVLFAGEA TSRNYYSTTH GAYLTGLREA NRLLEYFQCV DV
Best Arabidopsis Sequence Match ( AT4G29720.1 )
(BLAST)
001: MAKKARIVII GAGMAGLTAA NKLYTSSNNT FELSVVEGGS RIGGRINTSE FSSEKIEMGA TWIHGIGGSP VYRIAKETGS LVSDEPWECM DSTIDKAKTF
101: AEGGFEIEPS IVESISGLFT ALMELAQGKE ISQSDADLSR LAHIYETATR VCSKGSSTSV GSFLKSGFDA YWDSISNGGE EGVKGYGKWS RKSLEEAIFT
201: MFSNTQRTYT SADELSTLDF AAESEYQMFP GEEITIAKGY LSVIHHLASV LPQGVIQLNR KVTKIEWQSN EVKLHFSDGS VVFADHVIVT VSLGVLKAGI
301: ETDAELFSPP LPDFKSDAIR RLGYGVVNKL FVEMSQRKFP SLQLVFDRED SEFRFVKIPW WMRRTATITP IHSNSKVLLS WFAGKEALEL EKLTDEEIKD
401: AVMTTISCLT GKEVKNDTAK PLTNGSLNDD DEAMKITKVL KSKWGSDPLF RGSYSYVAVG SSGDDLDAMA EPLPKINKKV GQVNGHDQAK VHELQVMFAG
501: EATHRTHYST THGAYYSGLR EANRLLKHYK CNF
Arabidopsis Description
PAO5Probable polyamine oxidase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU79]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.