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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041150 Potato cytosol, mitochondrion, peroxisome, plastid 99.18 99.18
Solyc12g006370.1.1 Tomato plastid 86.53 86.89
CDY55500 Canola peroxisome 80.82 80.82
Bra037741.1-P Field mustard peroxisome 79.8 80.62
VIT_12s0028g01120.t01 Wine grape cytosol 80.61 80.61
Bra004737.1-P Field mustard peroxisome 80.61 80.61
CDY14867 Canola peroxisome 80.61 80.61
CDY30376 Canola peroxisome 80.61 80.61
CDY53655 Canola peroxisome 80.61 80.61
AT2G43020.1 Thale cress peroxisome 80.0 80.0
KRH73583 Soybean cytosol, peroxisome, plastid 78.37 78.85
KRH14536 Soybean cytosol, mitochondrion, peroxisome, plastid 78.37 78.53
KRH45972 Soybean cytosol, mitochondrion, peroxisome, plastid 78.16 78.16
AT3G59050.1 Thale cress cytosol, nucleus, peroxisome 76.94 77.25
KRG99036 Soybean plasma membrane, vacuole 78.16 76.91
CDX67773 Canola peroxisome 76.33 76.48
CDX83508 Canola peroxisome 74.9 76.46
Bra003362.1-P Field mustard cytosol 76.12 76.28
CDY42808 Canola peroxisome 74.49 76.04
Bra000284.1-P Field mustard cytosol 74.49 76.04
EES12883 Sorghum cytosol, mitochondrion, peroxisome, plastid 72.24 73.29
Zm00001d002266_P003 Maize peroxisome 72.04 73.08
Os04t0623300-01 Rice peroxisome 72.04 72.93
Zm00001d026334_P001 Maize peroxisome 71.63 72.82
TraesCS2D01G467300.1 Wheat peroxisome, plastid 70.82 71.69
TraesCS2A01G467300.1 Wheat peroxisome 70.82 71.69
GSMUA_Achr5P00660_001 Banana peroxisome 70.82 71.55
TraesCS2B01G490100.1 Wheat peroxisome, plastid 70.61 71.49
Zm00001d036513_P001 Maize cytosol, peroxisome, plastid 67.55 70.13
GSMUA_Achr11P... Banana mitochondrion 72.04 68.28
CDX98346 Canola cytosol 75.71 67.58
Solyc02g081390.2.1 Tomato cytosol 64.69 64.04
Solyc03g031880.2.1 Tomato cytosol 61.63 63.18
Solyc02g033080.1.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole 18.37 25.94
Solyc03g007160.1.1 Tomato plasma membrane, vacuole 9.18 24.32
Solyc05g055590.1.1 Tomato cytosol 31.43 24.25
Solyc05g018880.1.1 Tomato endoplasmic reticulum 25.31 24.22
Solyc01g087590.2.1 Tomato vacuole 24.49 24.14
Solyc07g039310.1.1 Tomato golgi 24.69 23.59
Solyc07g063500.2.1 Tomato cytosol, mitochondrion, nucleus 32.04 20.79
Solyc05g055580.1.1 Tomato cytosol, peroxisome, plastid 23.06 19.48
Solyc12g008850.1.1 Tomato cytosol 24.08 17.56
Solyc07g063450.1.1 Tomato cytosol 31.84 17.05
Solyc11g008320.1.1 Tomato nucleus 32.65 15.94
Solyc04g081100.2.1 Tomato nucleus 34.29 8.08
Protein Annotations
Gene3D:3.50.50.60Gene3D:3.90.660.10MapMan:8.5.2.2InterPro:Amino_oxidaseInterPro:FAD/NAD-bd_sfInterPro:Flavin_amine_oxidase
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
InterPro:IPR036188UniProt:K4CEL6PFAM:PF01593PRINTS:PR00757PANTHER:PTHR10742PANTHER:PTHR10742:SF264
SUPFAM:SSF51905SUPFAM:SSF54373EnsemblPlantsGene:Solyc07g043590.2EnsemblPlants:Solyc07g043590.2.1UniParc:UPI000276C5DBSEG:seg
Description
No Description!
Coordinates
chr7:+:57529400..57535605
Molecular Weight (calculated)
54621.3 Da
IEP (calculated)
5.729
GRAVY (calculated)
-0.144
Length
490 amino acids
Sequence
(BLAST)
001: MDSQHKSNRQ LQRAPCFSSA GQRAEASPSV IVIGGGIAGL AAARALYDAS FQVVVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPLIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQDLVTKVG ETFESILKET DRIRQEFSED MSIGRAISMV FDRRPDLRLE GIAHKVLQWY LCRMEGWFAA
201: DADSISLKYW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RLDHRVTQVV RRYNGVKVTV EDGRTFVADA AVVAVPLGVL KSNRIKFEPR LPEWKEAAIN
301: ELGVGIENKI ILHFEKVFWP NVEFLGVVAQ SSYECSYFLN LHKATGHPVL VYMPAGQLAH DIEKLSDEDA ANFAFKQLQR ILPNATTPIQ HLVSHWGTDV
401: NSLGSYSYDA VGKPHEFYER LRIPVDNIFF AGEATSMDYP GSVHGAYSTG LMAAEDCRMR VLERYGEVDL FQPVMGEDTP VAVPLLISRM
Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)
001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL
Arabidopsis Description
PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.