Factsheet for Os04t0623300-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 3
mitochondrion 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

peroxisome: 21796433

gfp PMID: 21796433 doi

Y Ono, DW Kim, K Watanabe, A Sasaki, M Niitsu, T Berberich, T Kusano, Y Takahashi

Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba, Sendai, Miyagi, 980-8577, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	95.25	95.25
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	95.04	95.04
TraesCS2A01G467300.1	Wheat	peroxisome	95.04	95.04
Zm00001d002266_P003	Maize	peroxisome	91.53	91.72
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	91.12	91.3
Zm00001d026334_P001	Maize	peroxisome	90.29	90.66
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	85.54	87.71
GSMUA_Achr5P00660_001	Banana	peroxisome	75.62	75.46
KRH73583	Soybean	cytosol, peroxisome, plastid	73.14	72.69
VIT_12s0028g01120.t01	Wine grape	cytosol	73.55	72.65
Solyc12g006370.1.1	Tomato	plastid	73.14	72.54
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	73.14	72.39
PGSC0003DMT400074125	Potato	plastid	72.93	72.34
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	72.93	72.04
Bra037741.1-P	Field mustard	peroxisome	72.11	71.96
GSMUA_Achr11P...	Banana	mitochondrion	76.65	71.76
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	72.31	71.43
CDY30376	Canola	peroxisome	72.11	71.22
AT2G43020.1	Thale cress	peroxisome	72.11	71.22
CDX67773	Canola	peroxisome	71.9	71.17
Bra003362.1-P	Field mustard	cytosol	71.9	71.17
CDY55500	Canola	peroxisome	71.9	71.02
Bra004737.1-P	Field mustard	peroxisome	71.9	71.02
CDY14867	Canola	peroxisome	71.69	70.82
CDY53655	Canola	peroxisome	71.49	70.61
CDY42808	Canola	peroxisome	69.21	69.79
KRG99036	Soybean	plasma membrane, vacuole	71.69	69.68
AT3G59050.1	Thale cress	cytosol, nucleus, peroxisome	70.25	69.67
CDX83508	Canola	peroxisome	68.8	69.38
Bra000284.1-P	Field mustard	cytosol	68.59	69.17
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	69.42	68.57
CDX98346	Canola	cytosol	71.49	63.02
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	58.68	58.32
Os04t0671300-01	Rice	peroxisome	59.09	58.13
Os09t0368500-01	Rice	golgi	23.76	24.26
Os09t0368200-00	Rice	golgi, vacuole	23.76	23.19
Os01t0710200-01	Rice	mitochondrion	23.14	21.88
Os08t0143400-01	Rice	nucleus	31.61	20.05
Os03t0193400-00	Rice	nucleus, peroxisome	7.44	17.82
Os04t0560300-01	Rice	cytosol	29.75	17.76
Os02t0755200-01	Rice	nucleus	29.13	16.61
Os10t0532100-01	Rice	nucleus	33.47	13.41
Os04t0671100-01	Rice	cytosol, mitochondrion, plastid	0.83	2.92
Os10t0532150-00	Rice	cytosol, nucleus, plastid	0.21	0.4

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	EntrezGene:4337046	MapMan:8.5.2.2	InterPro:Amino_oxidase	ProteinID:BAF15837.1
ProteinID:BAS91077.1	ProteinID:CAD41837.2	ProteinID:CAE03498.2	ProteinID:EEE61715.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:IPR036188	EnsemblPlantsGene:Os04g0623300	EnsemblPlants:Os04t0623300-01	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742
PANTHER:PTHR10742:SF264	UniProt:Q7X809	SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI000021C740	RefSeq:XP_015636130.1
SEG:seg	:	:	:	:	:

Description

POLYAMINE OXIDASE 3Polyamine oxidase, Seed germination (Os04t0623300-01);Similar to H0215F08.3 protein. (Os04t0623300-02);Similar to H0215F08.3 protein. (Os04t0623300-03);Similar to H0215F08.3 protein. (Os04t0623300-04)

Coordinates

chr4:-:31669253..31674595

Molecular Weight (calculated)

53647.4 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.060

Length

484 amino acids

Sequence
(BLAST)

001: MANNSSYGEN VRRKSHTPSA IVIGSGFAGI AAANALRNAS FEVVLLESRD RIGGRIHTDY SFGFPVDLGA SWLHGVCEEN PLAPIIGRLG LPLYRTSGDD
101: SVLFDHDLES YALYDTKGHQ VPQELVEKIG KVFETILEET GKLREETKED ISIAKAIAIV MERNPHLRQE GIAHDVLQWY LCRMEGWFAT DADAISLQGW
201: DQEVLLPGGH GLMVRGYRPV INTLAKGLDI RLGHRVVEIV RHRNRVEVTV SSGKTFVADA AVIAVPLGVL KANTIKFEPR LPEWKEEAIR ELSVGVENKI
301: ILHFSEVFWP NVEFLGVVSS TTYGCSYFLN LHKATGHPVL VYMPAGRLAC DIEKLSDEAA AQFAFSQLKK ILPNAAEPIH YLVSHWGSDE NTLGSYTFDG
401: VGKPRDLYEK LRIPVDNLFF AGEATSVQYT GTVHGAFSTG LMAAEECRMR VLERFRELDM LEMCHPAMGE QTATVSVPLL ISRL

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.