CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14536	Soybean	cytosol, mitochondrion, peroxisome, plastid	97.13	96.73
KRH45972	Soybean	cytosol, mitochondrion, peroxisome, plastid	83.16	82.65
VIT_12s0028g01120.t01	Wine grape	cytosol	82.14	81.63
KRG99036	Soybean	plasma membrane, vacuole	82.75	80.92
Bra037741.1-P	Field mustard	peroxisome	79.26	79.59
AT2G43020.1	Thale cress	peroxisome	79.67	79.18
CDY55500	Canola	peroxisome	79.67	79.18
Bra004737.1-P	Field mustard	peroxisome	79.47	78.98
CDY14867	Canola	peroxisome	79.47	78.98
CDY30376	Canola	peroxisome	79.47	78.98
CDY53655	Canola	peroxisome	79.47	78.98
Solyc07g043590.2.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	78.85	78.37
Solyc12g006370.1.1	Tomato	plastid	78.23	78.07
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	78.23	77.76
PGSC0003DMT400074125	Potato	plastid	77.82	77.66
AT3G59050.1	Thale cress	cytosol, nucleus, peroxisome	77.62	77.46
CDX67773	Canola	peroxisome	76.8	76.48
Bra003362.1-P	Field mustard	cytosol	76.59	76.28
CDY42808	Canola	peroxisome	75.15	76.25
CDX83508	Canola	peroxisome	74.95	76.04
Bra000284.1-P	Field mustard	cytosol	74.13	75.21
Os04t0623300-01	Rice	peroxisome	72.69	73.14
TraesCS2D01G467300.1	Wheat	peroxisome, plastid	72.07	72.52
TraesCS2A01G467300.1	Wheat	peroxisome	72.07	72.52
Zm00001d002266_P003	Maize	peroxisome	71.87	72.46
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	71.87	72.46
GSMUA_Achr5P00660_001	Banana	peroxisome	72.07	72.37
TraesCS2B01G490100.1	Wheat	peroxisome, plastid	71.87	72.31
Zm00001d026334_P001	Maize	peroxisome	71.25	71.99
Zm00001d036513_P001	Maize	cytosol, peroxisome, plastid	68.38	70.55
CDX98346	Canola	cytosol	76.39	67.76
GSMUA_Achr11P...	Banana	mitochondrion	71.05	66.92
KRH20055	Soybean	cytosol	64.27	63.49
KRG98020	Soybean	cytosol	64.27	63.49
KRH72905	Soybean	peroxisome	62.01	61.13
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	62.01	61.13
KRH39911	Soybean	plasma membrane	23.41	24.52
KRH48463	Soybean	cytosol, peroxisome	17.45	23.29
KRH32977	Soybean	plasma membrane	23.82	23.2
KRH13982	Soybean	plasma membrane	23.82	23.15
KRH02713	Soybean	golgi	23.41	21.51
KRH19156	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.61	21.38
KRH55370	Soybean	nucleus	31.62	20.73
KRH12386	Soybean	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	24.23	20.31
KRH37387	Soybean	golgi	24.64	20.0
KRH69303	Soybean	vacuole	14.99	18.96
KRH39215	Soybean	nucleus	31.83	18.47
KRH71619	Soybean	cytosol	30.8	17.12
KRH48462	Soybean	nucleus, plastid	11.91	15.76
KRH17390	Soybean	nucleus	34.91	8.98
KRH05909	Soybean	nucleus	34.7	8.86

Protein Annotations

EntrezGene:100811255	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	EMBL:ACUP02001284	InterPro:Amino_oxidase
InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	EnsemblPlantsGene:GLYMA_02G282000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1JJ00	InterPro:IPR036188	EnsemblPlants:KRH73583
ProteinID:KRH73583	ProteinID:KRH73583.1	PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264
SUPFAM:SSF51905	SUPFAM:SSF54373	UniParc:UPI0002337154	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:46427031..46431333

Molecular Weight (calculated)

54114.4 Da

IEP (calculated)

5.855

GRAVY (calculated)

-0.062

Length

487 amino acids

Sequence
(BLAST)

001: MESRFKSNPQ LRRGLCCAND DKQQERSPSV IVIGGGMAGI AAARALQDAS FQVILLESRE RPGGRIHTDY SFGFPVDLGA SWLHGVCPEN PLAPLIGKLG
101: LPLYRTSEDN SVLYDHDLES YALFDMDGNQ VPQELVTKIG KIFGAILEET NNVREEFSED MSILRALSIV FERKPELRLE GLSHKVLQWY LCRMEGWFAT
201: DADTISLKCW DQEVLLPGGH GLMVRGYQPV INTLAKGLDI RLGHRVTKIV RQYNEVKVTV ENGKTFVADA AIVAVPLGVL KAKSIKFEPK LPDWKEAAIS
301: DIGVGIENKI ILHFKNVFWP NVEFLGVVAE TSYGCSYFLN LHKAMGRPVL VYMPAGQLAK DIEKMSDEAA ANFAFMQLKK ILPDASSPIQ YLVSRWGTDI
401: NTLGSYSYDA VGKPHDLYEK LRVPVDNLFF AGEATSMLYT GSVHGAYSTG MMAAEDCRMR VLERYGELDL FPPVGDVSVI PLQISRL

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.