Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH48462 | Soybean | nucleus, plastid | 41.72 | 95.11 |
| KRH48463 | Soybean | cytosol, peroxisome | 40.88 | 93.97 |
| VIT_03s0017g01000.t01 | Wine grape | nucleus | 57.09 | 70.75 |
| Bra027014.1-P | Field mustard | cytosol | 56.02 | 67.34 |
| CDY46926 | Canola | cytosol | 56.02 | 67.34 |
| CDY31848 | Canola | nucleus | 56.02 | 67.05 |
| GSMUA_Achr3P06520_001 | Banana | extracellular, nucleus, peroxisome | 23.72 | 64.61 |
| PGSC0003DMT400095293 | Potato | nucleus | 62.34 | 64.41 |
| AT1G62830.1 | Thale cress | nucleus | 62.81 | 62.44 |
| GSMUA_Achr9P14930_001 | Banana | nucleus | 48.27 | 57.86 |
| TraesCS6A01G318300.1 | Wheat | nucleus | 54.23 | 55.35 |
| TraesCS6B01G348300.1 | Wheat | nucleus | 54.35 | 55.27 |
| Os02t0755200-01 | Rice | nucleus | 53.4 | 52.77 |
| Zm00001d018102_P001 | Maize | nucleus | 53.16 | 52.53 |
| HORVU6Hr1G078160.1 | Barley | plastid | 54.47 | 52.35 |
| TraesCS6D01G297500.1 | Wheat | plastid | 54.71 | 52.34 |
| OQU85392 | Sorghum | nucleus | 52.92 | 52.24 |
| KRH55370 | Soybean | nucleus | 44.7 | 50.47 |
| KRH71619 | Soybean | cytosol | 49.94 | 47.83 |
| KRH45972 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 18.59 | 31.84 |
| KRH73583 | Soybean | cytosol, peroxisome, plastid | 18.47 | 31.83 |
| KRG99036 | Soybean | plasma membrane, vacuole | 18.83 | 31.73 |
| KRG98020 | Soybean | cytosol | 18.47 | 31.44 |
| KRH14536 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 18.24 | 31.29 |
| KRH20055 | Soybean | cytosol | 18.24 | 31.03 |
| KRH72905 | Soybean | peroxisome | 18.24 | 30.97 |
| KRH17261 | Soybean | cytosol, peroxisome, plasma membrane | 17.88 | 30.36 |
| KRH02713 | Soybean | golgi | 15.49 | 24.53 |
| KRH19156 | Soybean | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 15.38 | 23.98 |
| KRH12386 | Soybean | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 15.38 | 22.2 |
| KRH32977 | Soybean | plasma membrane | 13.23 | 22.2 |
| KRH39911 | Soybean | plasma membrane | 12.16 | 21.94 |
| KRH13982 | Soybean | plasma membrane | 12.87 | 21.56 |
| KRH37387 | Soybean | golgi | 15.38 | 21.5 |
| KRH69303 | Soybean | vacuole | 8.22 | 17.92 |
| KRH17390 | Soybean | nucleus | 30.63 | 13.57 |
| KRH05909 | Soybean | nucleus | 30.39 | 13.37 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.1 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | UniProt:A0A0R0IKB1 | EMBL:ACUP02005925 |
| InterPro:Amino_oxidase | ncoils:Coil | InterPro:FAD/NAD-bd_sf | EnsemblPlantsGene:GLYMA_09G185800 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:Homeobox-like_sf | InterPro:IPR007526 | InterPro:IPR036188 | InterPro:IPR036388 |
| EnsemblPlants:KRH39215 | ProteinID:KRH39215 | ProteinID:KRH39215.1 | PFAM:PF01593 | PFAM:PF04433 | PFscan:PS50934 |
| PANTHER:PTHR10742 | PANTHER:PTHR10742:SF353 | SUPFAM:SSF46689 | SUPFAM:SSF51905 | SUPFAM:SSF54373 | InterPro:SWIRM |
| UniParc:UPI0006ED58AB | InterPro:WH-like_DNA-bd_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:41084980..41087762
Molecular Weight (calculated)
92259.2 Da
IEP (calculated)
5.912
GRAVY (calculated)
-0.228
Length
839 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYNQDRCYI WEDMNLYMSS FKRIIYGSGS QRNLILVSSK NKIIERSASM SDSTNTNPPP PPVAEPPPPP QSGSPENDVA MSPQNSSEDP DSSLPTQTTP
101: EPAVPDSPDS ATTRPDPNPP PRKRRRRKKF FTELTTGPST RRNDVAKDCD VEALIAISVG FPVDSLTEEE IEANVVSTVG GSEQSNYIVV RNHILARWRS
201: NVSVWLTHDR ALRSIRSEHK GLVETAYRFL LEHGYINFGL AQEIQTLKLK PFDGSDRGTV IVIGAGFAGL VAARQLVFMG FKVVILEGRT RPGGRVKTKK
301: MSGDGVEAAA DFGGSVLTGI NGNPLGVLAR QLGLPLHKVR DICPLYLPDG RSVDSEVDSR VEVSFNKLLE RVCKLRQAMI EEVKSVDVPL GTALEAFRRV
401: YMVAEDKEER MLLNWHLANL EYANATLMSN LSMAYWDQDD PYEMGGDHCF IPGGNEKFVR ALAEDLPIFY GRTVECVKYG SDGVLVYAGG QEFRGGMVLC
501: TVPLGVLKKG DIEFVPELPQ RKKDAIHRLG FGLLNKVAIL FPYNFWGGDI DTFGHLTEDL SMRGEFFLFY SYSSVSGGPL LVALVAGEAA IRFEMMSPVE
601: SVKRVLDILK NIFNPKGIVV PDPVQAACTR WGKDHFAYGS YSYVAVGSSG DDYDILAESV GDGTVFFAGE ATSKQYPATM HGAFLSGMRE AANILRVAKR
701: RSSMPIDTSK SVNQENDDLN KLFVKPDLTF GSFSALFDPN LNDLDSSSLL RVKIGGAVLD SGSLYLYALL PKKWVIELSQ LEGDENRMRM LNRNFGVSLV
801: GRKGLSSAAE SLIASIKLSR PNLNEAENGL IMTGKENSQ
101: EPAVPDSPDS ATTRPDPNPP PRKRRRRKKF FTELTTGPST RRNDVAKDCD VEALIAISVG FPVDSLTEEE IEANVVSTVG GSEQSNYIVV RNHILARWRS
201: NVSVWLTHDR ALRSIRSEHK GLVETAYRFL LEHGYINFGL AQEIQTLKLK PFDGSDRGTV IVIGAGFAGL VAARQLVFMG FKVVILEGRT RPGGRVKTKK
301: MSGDGVEAAA DFGGSVLTGI NGNPLGVLAR QLGLPLHKVR DICPLYLPDG RSVDSEVDSR VEVSFNKLLE RVCKLRQAMI EEVKSVDVPL GTALEAFRRV
401: YMVAEDKEER MLLNWHLANL EYANATLMSN LSMAYWDQDD PYEMGGDHCF IPGGNEKFVR ALAEDLPIFY GRTVECVKYG SDGVLVYAGG QEFRGGMVLC
501: TVPLGVLKKG DIEFVPELPQ RKKDAIHRLG FGLLNKVAIL FPYNFWGGDI DTFGHLTEDL SMRGEFFLFY SYSSVSGGPL LVALVAGEAA IRFEMMSPVE
601: SVKRVLDILK NIFNPKGIVV PDPVQAACTR WGKDHFAYGS YSYVAVGSSG DDYDILAESV GDGTVFFAGE ATSKQYPATM HGAFLSGMRE AANILRVAKR
701: RSSMPIDTSK SVNQENDDLN KLFVKPDLTF GSFSALFDPN LNDLDSSSLL RVKIGGAVLD SGSLYLYALL PKKWVIELSQ LEGDENRMRM LNRNFGVSLV
801: GRKGLSSAAE SLIASIKLSR PNLNEAENGL IMTGKENSQ
001: MSTETKETRP ETKPEDLGTH TTVDVPGEEP LGELIADDVN EVVSDASATE TDFSLSPSQS EQNIEEDGQN SLDDQSPLTE LQPLPLPPPL PVEARISESL
101: GEEESSDLVT EQQSQNPNAA EPGPRARKRR RRKRFFTEIN ANPAFSRNRR TSVGKEVDSE ALIAMSVGFP VYSLTEEEIE ANVVSIIGGK DQANYIVVRN
201: HIIALWRSNV SNWLTRDHAL ESIRAEHKTL VDTAYNFLLE HGYINFGLAP VIKEAKLRSF DGVEPPNVVV VGAGLAGLVA ARQLLSMGFR VLVLEGRDRP
301: GGRVKTRKMK GGDGVEAMAD VGGSVLTGIN GNPLGVLARQ LGLPLHKVRD ICPLYLPNGE LADASVDSKI EASFNKLLDR VCKLRQSMIE ENKSVDVPLG
401: EALETFRLVY GVAEDQQERM LLDWHLANLE YANATLLGNL SMAYWDQDDP YEMGGDHCFI PGGNEIFVHA LAENLPIFYG STVESIRYGS NGVLVYTGNK
501: EFHCDMALCT VPLGVLKKGS IEFYPELPHK KKEAIQRLGF GLLNKVAMLF PCNFWGEEID TFGRLTEDPS TRGEFFLFYS YSSVSGGPLL VALVAGDAAE
601: RFETLSPTDS VKRVLQILRG IYHPKGIVVP DPVQALCSRW GQDKFSYGSY SYVAVGSSGD DYDILAESVG DGRVFFAGEA TNRQYPATMH GAFLSGMREA
701: ANILRVARRR ASSSALNPNQ ICIDKEEEVD EEEDRCLDQL FETPDLTFGN FSVLFTPNSD EPESMSLLRV RIQMEKPESG LWLYGLVTRK QAIELGEMDG
801: DELRNEYLRE KLGLVPVERK SLSQEGESMI SSLKAARLNR QIFD
101: GEEESSDLVT EQQSQNPNAA EPGPRARKRR RRKRFFTEIN ANPAFSRNRR TSVGKEVDSE ALIAMSVGFP VYSLTEEEIE ANVVSIIGGK DQANYIVVRN
201: HIIALWRSNV SNWLTRDHAL ESIRAEHKTL VDTAYNFLLE HGYINFGLAP VIKEAKLRSF DGVEPPNVVV VGAGLAGLVA ARQLLSMGFR VLVLEGRDRP
301: GGRVKTRKMK GGDGVEAMAD VGGSVLTGIN GNPLGVLARQ LGLPLHKVRD ICPLYLPNGE LADASVDSKI EASFNKLLDR VCKLRQSMIE ENKSVDVPLG
401: EALETFRLVY GVAEDQQERM LLDWHLANLE YANATLLGNL SMAYWDQDDP YEMGGDHCFI PGGNEIFVHA LAENLPIFYG STVESIRYGS NGVLVYTGNK
501: EFHCDMALCT VPLGVLKKGS IEFYPELPHK KKEAIQRLGF GLLNKVAMLF PCNFWGEEID TFGRLTEDPS TRGEFFLFYS YSSVSGGPLL VALVAGDAAE
601: RFETLSPTDS VKRVLQILRG IYHPKGIVVP DPVQALCSRW GQDKFSYGSY SYVAVGSSGD DYDILAESVG DGRVFFAGEA TNRQYPATMH GAFLSGMREA
701: ANILRVARRR ASSSALNPNQ ICIDKEEEVD EEEDRCLDQL FETPDLTFGN FSVLFTPNSD EPESMSLLRV RIQMEKPESG LWLYGLVTRK QAIELGEMDG
801: DELRNEYLRE KLGLVPVERK SLSQEGESMI SSLKAARLNR QIFD
Arabidopsis Description
LDL1Lysine-specific histone demethylase 1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.