Factsheet for Os02t0755200-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G348300.1	Wheat	nucleus	83.98	86.42
TraesCS6A01G318300.1	Wheat	nucleus	83.63	86.37
Zm00001d018102_P001	Maize	nucleus	84.69	84.69
OQU85392	Sorghum	nucleus	84.69	84.59
HORVU6Hr1G078160.1	Barley	plastid	84.1	81.79
TraesCS6D01G297500.1	Wheat	plastid	83.75	81.07
GSMUA_Achr3P06520_001	Banana	extracellular, nucleus, peroxisome	25.32	69.81
GSMUA_Achr9P14930_001	Banana	nucleus	52.41	63.57
VIT_03s0017g01000.t01	Wine grape	nucleus	48.53	60.86
KRH48463	Soybean	cytosol, peroxisome	25.68	59.73
Bra027014.1-P	Field mustard	cytosol	45.82	55.73
CDY46926	Canola	cytosol	45.82	55.73
CDY31848	Canola	nucleus	45.58	55.21
PGSC0003DMT400095293	Potato	nucleus	52.41	54.8
KRH39215	Soybean	nucleus	52.77	53.4
AT1G62830.1	Thale cress	nucleus	51.94	52.25
KRH48462	Soybean	nucleus, plastid	22.26	51.36
Os04t0560300-01	Rice	cytosol	45.82	47.97
Os08t0143400-01	Rice	nucleus	40.64	45.22
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	17.67	30.8
Os04t0671300-01	Rice	peroxisome	17.67	30.49
Os04t0623300-01	Rice	peroxisome	16.61	29.13
Os01t0710200-01	Rice	mitochondrion	16.02	26.56
Os09t0368200-00	Rice	golgi, vacuole	14.61	25.0
Os09t0368500-01	Rice	golgi	13.66	24.47
Os10t0532100-01	Rice	nucleus	26.74	18.79
Os03t0193400-00	Rice	nucleus, peroxisome	4.36	18.32
Os10t0532150-00	Rice	cytosol, nucleus, plastid	0.71	2.42
Os04t0671100-01	Rice	cytosol, mitochondrion, plastid	0.35	2.19

Protein Annotations

Gene3D:1.10.10.10	MapMan:12.3.3.8.1	Gene3D:3.50.50.60	Gene3D:3.90.660.10	EntrezGene:4330771	EMBL:AK070699
InterPro:Amino_oxidase	ProteinID:BAD17247.1	ProteinID:BAF10075.1	ProteinID:BAS80985.1	ncoils:Coil	InterPro:FAD/NAD-bd_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006325	GO:GO:0006464
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491
GO:GO:0016575	GO:GO:0019538	GO:GO:0048364	GO:GO:0051568	GO:GO:0055114	InterPro:Homeobox-like_sf
InterPro:IPR007526	InterPro:IPR036188	InterPro:IPR036388	EnsemblPlantsGene:Os02g0755200	EnsemblPlants:Os02t0755200-01	PFAM:PF01593
PFAM:PF04433	PFscan:PS50934	PANTHER:PTHR10742	PANTHER:PTHR10742:SF353	UniProt:Q6Z690	SUPFAM:SSF46689
SUPFAM:SSF51905	SUPFAM:SSF54373	InterPro:SWIRM	UniParc:UPI000035AE5F	InterPro:WH-like_DNA-bd_sf	RefSeq:XP_015623199.1
SEG:seg	:	:	:	:	:

Description

SWIRM domain-containing protein HDMA702, histone lysine-specific demethylase 702, polyamine oxidase 8Similar to amine oxidase family protein. (Os02t0755200-01)

Coordinates

chr2:-:31773356..31776401

Molecular Weight (calculated)

90753.0 Da

IEP (calculated)

5.131

GRAVY (calculated)

-0.123

Length

849 amino acids

Sequence
(BLAST)

001: MEEGSEAQPP LQPEAVSAEA SEPPPPVPMD QDEGQAAAAE AMEGEAEGAA AAAGTIEGEA GYAAADADPM EDEAADEAGA AEPMEDDPPT SSAPSATAAV
101: DDSTIARKRR RRKKQFPGMI PTAGVRVLRA AASAPSAAHL NGVPRRRGRP PTSSSLRLAR ELDAEALIAL AAGFPADSLS EDEVAAAVLP RIGGVDQTNY
201: LVVRNHVLAL WRSNPLSPVA SNAALASIRA EHAHLVAAAH SFLSDHAYIN FGLAPSVISL PPCPPPSLPP PSVLIVGAGF AGLAAARHLM SLGFKVAIVE
301: GRLRPGGRVF TKSMRSTAAE YPDIAAAADL GGSVLTGING NPLGVIARQL GFPLHKVRDK CPLYLPDGRP VDPDMDARVE AAFNQLLDKV CQLRQVVADS
401: IPHGVDVSLG MALEAFRAAH GVAAEREERM LLDWHLANLE YANAAPLVDL SMAFWDQDDP YEMGGDHCFI PGGNSRFVRA LADGIPIFYG QNVRRIQYGC
501: DGAMVYTDKQ TFRGDMVLCT VPLGVLKKGN IQFVPELPAQ KREAIERLGF GLLNKVVLLF PYDFWDGRID TFGHLTEDSG QRGEFFLFYS YSSVSGGPLL
601: IALVAGESAI EFEKTSPAEN VEKVLETLRK IFSPKGIEVP KPLQAICTRW GTDKFTYGSY SYVAIGSSGD DYDILAESVC DRVFFAGEAT NRRYPATMHG
701: ALLSGYREAA NIVRAARRRA KKVDSPKKMD VNNEVKYEVK VDNIDLDDLF RTPDAAFGGF SVLHDPSTSE PDSISLLRVG IGARKLGSGS LFLYGLIMRK
801: NVANLAAMEG DEQRLSTLYR DFGTKLVGLD GLGDSGSSLI SRIKAAARK

Best Arabidopsis Sequence Match ( AT1G62830.1 )
(BLAST)

001: MSTETKETRP ETKPEDLGTH TTVDVPGEEP LGELIADDVN EVVSDASATE TDFSLSPSQS EQNIEEDGQN SLDDQSPLTE LQPLPLPPPL PVEARISESL
101: GEEESSDLVT EQQSQNPNAA EPGPRARKRR RRKRFFTEIN ANPAFSRNRR TSVGKEVDSE ALIAMSVGFP VYSLTEEEIE ANVVSIIGGK DQANYIVVRN
201: HIIALWRSNV SNWLTRDHAL ESIRAEHKTL VDTAYNFLLE HGYINFGLAP VIKEAKLRSF DGVEPPNVVV VGAGLAGLVA ARQLLSMGFR VLVLEGRDRP
301: GGRVKTRKMK GGDGVEAMAD VGGSVLTGIN GNPLGVLARQ LGLPLHKVRD ICPLYLPNGE LADASVDSKI EASFNKLLDR VCKLRQSMIE ENKSVDVPLG
401: EALETFRLVY GVAEDQQERM LLDWHLANLE YANATLLGNL SMAYWDQDDP YEMGGDHCFI PGGNEIFVHA LAENLPIFYG STVESIRYGS NGVLVYTGNK
501: EFHCDMALCT VPLGVLKKGS IEFYPELPHK KKEAIQRLGF GLLNKVAMLF PCNFWGEEID TFGRLTEDPS TRGEFFLFYS YSSVSGGPLL VALVAGDAAE
601: RFETLSPTDS VKRVLQILRG IYHPKGIVVP DPVQALCSRW GQDKFSYGSY SYVAVGSSGD DYDILAESVG DGRVFFAGEA TNRQYPATMH GAFLSGMREA
701: ANILRVARRR ASSSALNPNQ ICIDKEEEVD EEEDRCLDQL FETPDLTFGN FSVLFTPNSD EPESMSLLRV RIQMEKPESG LWLYGLVTRK QAIELGEMDG
801: DELRNEYLRE KLGLVPVERK SLSQEGESMI SSLKAARLNR QIFD

Arabidopsis Description

LDL1Lysine-specific histone demethylase 1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.