Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G092910.1 | Barley | nucleus | 79.44 | 10.84 |
| TraesCS6D01G389200.1 | Wheat | nucleus | 78.23 | 10.48 |
| TraesCS6A01G405500.2 | Wheat | nucleus | 78.23 | 10.48 |
| TraesCS6B01G449900.1 | Wheat | nucleus | 77.82 | 10.46 |
| EER94594 | Sorghum | nucleus | 68.95 | 9.51 |
| Zm00001d029714_P001 | Maize | extracellular | 69.35 | 9.48 |
| PGSC0003DMT400009649 | Potato | cytosol | 48.79 | 9.34 |
| GSMUA_Achr2P09900_001 | Banana | cytosol | 53.23 | 9.33 |
| Bra040571.1-P | Field mustard | nucleus | 45.56 | 7.16 |
| CDY22771 | Canola | nucleus | 45.16 | 7.1 |
| CDY42542 | Canola | nucleus | 45.16 | 7.03 |
| AT4G16310.4 | Thale cress | nucleus | 45.16 | 6.88 |
| Os04t0671100-01 | Rice | cytosol, mitochondrion, plastid | 3.63 | 6.57 |
| KRH17390 | Soybean | nucleus | 47.98 | 6.28 |
| KRH05909 | Soybean | nucleus | 47.98 | 6.24 |
| Solyc04g081100.2.1 | Tomato | nucleus | 47.98 | 5.73 |
| Os08t0143400-01 | Rice | nucleus | 4.03 | 1.31 |
| Os04t0560300-01 | Rice | cytosol | 3.23 | 0.99 |
| Os02t0755200-01 | Rice | nucleus | 2.42 | 0.71 |
| Os04t0623300-01 | Rice | peroxisome | 0.4 | 0.21 |
| Os04t0671300-01 | Rice | peroxisome | 0.4 | 0.2 |
| Os09t0368500-01 | Rice | golgi | 0.0 | 0.0 |
| Os10t0532100-01 | Rice | nucleus | 0.0 | 0.0 |
| Os09t0368200-00 | Rice | golgi, vacuole | 0.0 | 0.0 |
| Os04t0671200-01 | Rice | cytosol, peroxisome, plastid | 0.0 | 0.0 |
| Os03t0193400-00 | Rice | nucleus, peroxisome | 0.0 | 0.0 |
| Os01t0710200-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os10t0532150-00 | EnsemblPlantsGene:Os10g0532150 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016491 | GO:GO:0055114 | ProteinID:BAT11789.1 | UniParc:UPI000393ACA5 | UniProt:A0A0P0XWJ2 | MapMan:35.1 |
Description
SWIRM domain-containing protein HDMA704, histone lysine-specific demethylase 704, polyamine oxidase 11Similar to Amine oxidase, flavin-containing family protein, expressed. (Os10t0532150-00)
Coordinates
chr10:+:20687168..20689079
Molecular Weight (calculated)
28355.2 Da
IEP (calculated)
6.861
GRAVY (calculated)
-0.865
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDHYLDESD TRKKVLSDNL VRLECISEID SRNDKAKNPS VDHANCADVD SSKMTGDNCT QRSYSNENAC LINIRDHSTD SGAVDSRFTR AWVDTDTIFI
101: DGVKDPLAIE RWQQQAMEAD KEFYSRIRIP DEEDSSSQKQ TCRSSASQVA ESKPASDGQS RGVEHLRQGL INFISTVLMP LYRNKKVDRE GYKGIMRKAV
201: TKIIETCTEG EKMMTVHEFL DSKRKNKIQT FVDKLVERHC HMNRPPNS
101: DGVKDPLAIE RWQQQAMEAD KEFYSRIRIP DEEDSSSQKQ TCRSSASQVA ESKPASDGQS RGVEHLRQGL INFISTVLMP LYRNKKVDRE GYKGIMRKAV
201: TKIIETCTEG EKMMTVHEFL DSKRKNKIQT FVDKLVERHC HMNRPPNS
0001: MDGKEKKSGS KRGSKVFQFD DDADDDEPIG SLLEIMKHKS SKKDKVETES TGKQRQKQVV EKKLSALGKD SEDMDDTLAS FRKRLKGNKK GVESGTSRVR
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
0101: NHEGVDTVTN SNLKPIEEAN KNEVQSVLLR ENGASNSIQK CASETGTLLH KFSGKDKAAS PSHEKVETVS SEKEADVFHQ ITKEESEIPM SEKAVELSRV
0201: SVPMPDVHGE VNCTIAPDKH IHLGEPTSES GYYREKNLVM CDCGTQFNFE DRSFESNTQV TLCQKCKYSS HHNASNGGGI QVNTLEDGTA QASPVSIIPC
0301: EDENFRGDAI SLPNSGKPST LQRPERIAKK RKLGNMVYEG DVKWENEQGF LDCQSDKSFK GSDKCGFVPS ISKEIEIGRA AAVTAGLKAQ SVSPIEKIIL
0401: KEVLKRKGSN QEYLVCRNSI LGLWSKNVSR ILPVTECGVT GGPSESELPS ASLIREVYKF LDQRGYINAG ISSVNGKAAS STNQDYDLLQ GRQLEESSMA
0501: SVADSEEGVA FILGQVKAVE STSEGKKCAL QNDERDLVGC ATSEMLESIS KKCEASIIDD NKRSVSMNAL QDSTASNVEK HPETFSVAKP ALSSTLSSAH
0601: SNQMRGRDCV PCEVIDEKKV IVIGAGPAGL TAARHLQRQG FSVTVLEARS RVGGRVFTDR SSLSVPVDLG ASIITGIEAD VPSERMPDPS VLVCNQLGLE
0701: LSVLHGFCPL YDTVTGKKVP AELDDALQAE FNSLIDDVDL LVEEIGKERA NKMSLEDGLE YGLQRLRMPH DKVNIDKFGL LNSSSKTGIR GPFMQDESWK
0801: DDFLNPLERR VMNWHFAHTE YGCAAVLKEV SLPHWNQDEF YGGFGGPHAM IKGGYSRVVE SLAEGLDIHL NKIVSDVSYV SDVSAMDNSK HKVRVSTSNG
0901: CEYLGDAVLV TVPLGCLKAE TIKFSPPLPD WKYASIKQLG FGVLNKVVLE FPTVFWDDSV DYFGATAEET DLRGECFMFW NVKKTVGAPV LIALVVGKAA
1001: FEYTNKSKSE HVNHAMMVLR KLFGGDLVPD PVASVVTDWG TDPYSYGAYS YVAIGASGED YDVLGRPVQN CLFFAGEATC KEHPDTVGGA MMTGVREAVR
1101: IIDILRSGND YTAEIETLEK AQRKSVPVRD EVRDLIKRLE VVELSNVLAR QSLLRNMFFS AKTTVGRLHL AKELLNLPGE TLKSFAGTKE GLAVLNSWIL
1201: DSMGKNGTQL LRHCVHILVR VTSDLFALRL SGIGKTVKEK VCAHTSRDIR AIASQLVNVW LDLYRKEKAN SGKKSLRQAN TTNTSRIRRK LNSPDTDSKG
1301: KLSNGNDVKT DEEFEDNQLP MSEEEKAVFA EAEAARAAAE AAAKAFSEAY HNTSLQLPKI PSFHKFARRE QYAKMDESDF RKKFPGNVLG RQDCMSEIDS
1401: RNCKVRDWYD FPASCLDLDS ARIPVDNYSQ PSHSNELVSH SKFRECSGES VAADTSFLTG AWVDTGGSSD GFKDSQAIDR WQSQAAAADP EFFNRTLHIK
1501: DEEDSIACST GPPSWKHDQR ANECSVSQVT VNKEPHKNHI RSADRLKQGV VDFVASLLMA PYRAKKIDRD VYKSIMKKTA TKVMQHTTDV EKAMAVTQFL
1601: DSKRKNKIRD FVDKQVDKYM VIPQVPKP
Arabidopsis Description
LDL3Lysine-specific histone demethylase 1 homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JLS1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.