Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G057320.1 | Barley | extracellular, peroxisome | 12.95 | 95.45 |
| EES12649 | Sorghum | plastid | 89.15 | 89.48 |
| Zm00001d002684_P001 | Maize | extracellular | 88.04 | 88.37 |
| TraesCS2B01G425100.1 | Wheat | plastid | 86.44 | 86.86 |
| HORVU2Hr1G096300.1 | Barley | plastid | 47.1 | 83.96 |
| TraesCS2D01G404400.1 | Wheat | plastid | 86.44 | 83.75 |
| TraesCS2A01G407400.1 | Wheat | cytosol | 85.82 | 83.05 |
| GSMUA_Achr4P25280_001 | Banana | plastid | 71.64 | 75.75 |
| PGSC0003DMT400060071 | Potato | peroxisome | 42.17 | 69.51 |
| Solyc02g033080.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 28.11 | 65.71 |
| KRH71619 | Soybean | cytosol | 68.19 | 63.13 |
| Solyc05g055590.1.1 | Tomato | cytosol | 47.84 | 61.1 |
| CDY00667 | Canola | cytosol, plastid | 68.06 | 60.39 |
| Bra001357.1-P | Field mustard | nucleus, plastid | 68.43 | 60.33 |
| CDX73929 | Canola | nucleus, plastid | 68.56 | 60.3 |
| AT3G10390.3 | Thale cress | plastid | 68.93 | 59.72 |
| VIT_13s0019g04820.t01 | Wine grape | nucleus | 71.02 | 56.14 |
| PGSC0003DMT400019222 | Potato | cytosol, plastid | 67.08 | 54.62 |
| Solyc11g008320.1.1 | Tomato | nucleus | 66.83 | 53.98 |
| PGSC0003DMT400060365 | Potato | plastid | 35.88 | 53.69 |
| Os02t0755200-01 | Rice | nucleus | 47.97 | 45.82 |
| Os08t0143400-01 | Rice | nucleus | 42.79 | 45.48 |
| Solyc05g055580.1.1 | Tomato | cytosol, peroxisome, plastid | 32.31 | 45.17 |
| Os04t0671300-01 | Rice | peroxisome | 20.35 | 33.54 |
| Os04t0671200-01 | Rice | cytosol, peroxisome, plastid | 19.73 | 32.85 |
| Os04t0623300-01 | Rice | peroxisome | 17.76 | 29.75 |
| Os01t0710200-01 | Rice | mitochondrion | 15.91 | 25.2 |
| Os09t0368200-00 | Rice | golgi, vacuole | 14.18 | 23.19 |
| Os09t0368500-01 | Rice | golgi | 13.32 | 22.78 |
| Os03t0193400-00 | Rice | nucleus, peroxisome | 5.06 | 20.3 |
| Os10t0532100-01 | Rice | nucleus | 27.37 | 18.38 |
| Os04t0671100-01 | Rice | cytosol, mitochondrion, plastid | 0.99 | 5.84 |
| Os10t0532150-00 | Rice | cytosol, nucleus, plastid | 0.99 | 3.23 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:12.3.3.8.1 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | UniProt:A0A0P0WDM4 | InterPro:Amino_oxidase |
| ProteinID:BAS90468.1 | InterPro:FAD/NAD-bd_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006325 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Homeobox-like_sf | InterPro:IPR007526 | InterPro:IPR036188 |
| InterPro:IPR036388 | EnsemblPlantsGene:Os04g0560300 | EnsemblPlants:Os04t0560300-01 | PFAM:PF01593 | PFAM:PF04433 | PFscan:PS50934 |
| PANTHER:PTHR10742 | PANTHER:PTHR10742:SF260 | SUPFAM:SSF46689 | SUPFAM:SSF51905 | SUPFAM:SSF54373 | InterPro:SWIRM |
| UniParc:UPI000393C2F6 | InterPro:WH-like_DNA-bd_sf | SEG:seg | : | : | : |
Description
SWIRM domain-containing protein HDMA701, histone lysine-specific demethylase 701, polyamine oxidase 9Similar to flowering locus D. (Os04t0560300-01)
Coordinates
chr4:-:28067392..28070371
Molecular Weight (calculated)
87342.6 Da
IEP (calculated)
8.053
GRAVY (calculated)
-0.199
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDQPPPYTP LPLLSSFPPN PYPDQTPDPA STPTLVLPNP AFPNKRKRTG FRRKLPSGSP AAPVAVAASP SAQPPPRASA ADDIIVINRE PTAEAVTALT
101: AGFPADSLTD EEIEAGVVSD VGGIEQVNYI LIRNHLLTRW RETFNSWLAK ESFATLIPPH CDHLLNAAYS FLVSHGHINF GVAPAIKERI PKEPTRHNTV
201: IVVGAGLAGL AAARQLVAFG FKVVVLEGRK RCGGRVYTKK MEGGGRSAAG DLGGSVLTGT FGNPLGIVAK QLGLPMHKIR DKCPLYRPDG SPVDPEVDKK
301: VEGTFNKLLD KSSLLRASMG DVAMDVSLGA ALETLRQTDG DLSTDQEMNL FNWHLANLEY ANAGLLSKLS LAFWDQDDPY DMGGDHCFLP GGNGRLVQAL
401: AENVPIVYER TVHTIRYGGD GVQVVVNGGQ VYEGDMALCT VPLGVLKNGG VKFVPELPQR KLDSIKRLGF GLLNKVAMLF PHVFWSTDLD TFGHLTEDPS
501: HRGEFFLFYS YATVAGGPLL MALVAGEAAH NFETTPPTDA VSSVLKILRG IYEPQGIEVP DPLQSVCTRW GTDSFSLGSY SHVAVGASGD DYDILAESVG
601: DGRLFFAGEA TTRRYPATMH GAFISGLREA ANITLHANAR AAKSKVEKGP STNTQACAAL LMDLFRQPDL EFGSFSVIFG GQASDPKSPA ILKVELGGPR
701: KKGATEGGKA DQHHSNKLLF QQLQSHFNQQ QQLYVYTLLS RQQAMELREV RGGDEMRLHY LCEKLGVKLV GRKGLGPGAD AVIASIKAER NSSRTKTRPS
801: KLKIGIPKSK S
101: AGFPADSLTD EEIEAGVVSD VGGIEQVNYI LIRNHLLTRW RETFNSWLAK ESFATLIPPH CDHLLNAAYS FLVSHGHINF GVAPAIKERI PKEPTRHNTV
201: IVVGAGLAGL AAARQLVAFG FKVVVLEGRK RCGGRVYTKK MEGGGRSAAG DLGGSVLTGT FGNPLGIVAK QLGLPMHKIR DKCPLYRPDG SPVDPEVDKK
301: VEGTFNKLLD KSSLLRASMG DVAMDVSLGA ALETLRQTDG DLSTDQEMNL FNWHLANLEY ANAGLLSKLS LAFWDQDDPY DMGGDHCFLP GGNGRLVQAL
401: AENVPIVYER TVHTIRYGGD GVQVVVNGGQ VYEGDMALCT VPLGVLKNGG VKFVPELPQR KLDSIKRLGF GLLNKVAMLF PHVFWSTDLD TFGHLTEDPS
501: HRGEFFLFYS YATVAGGPLL MALVAGEAAH NFETTPPTDA VSSVLKILRG IYEPQGIEVP DPLQSVCTRW GTDSFSLGSY SHVAVGASGD DYDILAESVG
601: DGRLFFAGEA TTRRYPATMH GAFISGLREA ANITLHANAR AAKSKVEKGP STNTQACAAL LMDLFRQPDL EFGSFSVIFG GQASDPKSPA ILKVELGGPR
701: KKGATEGGKA DQHHSNKLLF QQLQSHFNQQ QQLYVYTLLS RQQAMELREV RGGDEMRLHY LCEKLGVKLV GRKGLGPGAD AVIASIKAER NSSRTKTRPS
801: KLKIGIPKSK S
001: MVSFSAPKKR RRGRSQRSMS SLNSLPVPNV GLLPGNSNFV SSSASSSGRF NVEVVNGSNQ TVKSYPGIGD EIITINKEAT TEALLALTAG FPADSLTEEE
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ
101: IEFGVVPIVG GIEQVNYILI RNHIISKWRE NISSWVTKEM FLNSIPKHCS SLLDSAYNYL VTHGYINFGI AQAIKDKFPA QSSKSSVIIV GAGLSGLAAA
201: RQLMRFGFKV TVLEGRKRPG GRVYTKKMEA NRVGAAADLG GSVLTGTLGN PLGIIARQLG SSLYKVRDKC PLYRVDGKPV DPDVDIKVEV AFNQLLDKAS
301: KLRQLMGDVS MDVSLGAALE TFRQVSGNDV ATEEMGLFNW HLANLEYANA GLVSKLSLAF WDQDDPYDMG GDHCFLPGGN GRLVQALAEN VPILYEKTVQ
401: TIRYGSNGVK VTAGNQVYEG DMVLCTVPLG VLKNGSIKFV PELPQRKLDC IKRLGFGLLN KVAMLFPYVF WSTDLDTFGH LTEDPNYRGE FFLFYSYAPV
501: AGGALLIALV AGEAAHKFET MPPTDAVTRV LHILRGIYEP QGINVPDPLQ TVCTRWGGDP FSLGSYSNVA VGASGDDYDI LAESVGDGRL FFAGEATTRR
601: YPATMHGAFV TGLREAANMA QSAKARGIRK RIDRNPSRNA HSCAILLADL FRDPDLEFGS FCIIFSRRNP DPKSPAILRV TLSEPRKRNE DPKADQHSNK
701: ILFQQLQSHF NQQQQIQVYT LLTRQQALDL REVRGGDEKR LYYLCETLGV KLVGRKGLGV GADSVIASIK AERTGRKLPS SSTSGTKSGI LKAKSGALKR
801: KMIRRIKGPL PLKQSNNNGV SESIKSESLG NGKSLEQQQQ PRIVESIGGG SSMQGESKSL STGVASSSGG SLHVGGETMK KIEQ
Arabidopsis Description
FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.