Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g033080.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 52.07 | 87.03 |
| PGSC0003DMT400060365 | Potato | plastid | 63.1 | 67.53 |
| Solyc05g055590.1.1 | Tomato | cytosol | 71.9 | 65.67 |
| HORVU1Hr1G057320.1 | Barley | extracellular, peroxisome | 11.38 | 60.0 |
| HORVU2Hr1G096300.1 | Barley | plastid | 34.14 | 43.52 |
| GSMUA_Achr4P25280_001 | Banana | plastid | 44.83 | 33.9 |
| Zm00001d002684_P001 | Maize | extracellular | 45.17 | 32.43 |
| Os04t0560300-01 | Rice | cytosol | 45.17 | 32.31 |
| EES12649 | Sorghum | plastid | 45.0 | 32.3 |
| TraesCS2B01G425100.1 | Wheat | plastid | 44.66 | 32.09 |
| KRH71619 | Soybean | cytosol | 46.72 | 30.94 |
| TraesCS2D01G404400.1 | Wheat | plastid | 44.48 | 30.82 |
| TraesCS2A01G407400.1 | Wheat | cytosol | 44.48 | 30.79 |
| Solyc07g063500.2.1 | Tomato | cytosol, mitochondrion, nucleus | 38.79 | 29.8 |
| Solyc11g008320.1.1 | Tomato | nucleus | 51.38 | 29.68 |
| AT3G10390.3 | Thale cress | plastid | 46.72 | 28.95 |
| CDY00667 | Canola | cytosol, plastid | 45.52 | 28.88 |
| CDX73929 | Canola | nucleus, plastid | 45.52 | 28.63 |
| Bra001357.1-P | Field mustard | nucleus, plastid | 45.17 | 28.48 |
| VIT_13s0019g04820.t01 | Wine grape | nucleus | 49.48 | 27.97 |
| Solyc07g063450.1.1 | Tomato | cytosol | 37.59 | 23.83 |
| Solyc07g043590.2.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 19.48 | 23.06 |
| Solyc12g006370.1.1 | Tomato | plastid | 19.14 | 22.75 |
| Solyc02g081390.2.1 | Tomato | cytosol | 18.79 | 22.02 |
| Solyc03g031880.2.1 | Tomato | cytosol | 17.59 | 21.34 |
| Solyc03g007160.1.1 | Tomato | plasma membrane, vacuole | 6.03 | 18.92 |
| Solyc05g018880.1.1 | Tomato | endoplasmic reticulum | 16.21 | 18.36 |
| Solyc07g039310.1.1 | Tomato | golgi | 16.03 | 18.13 |
| Solyc01g087590.2.1 | Tomato | vacuole | 14.31 | 16.7 |
| Solyc12g008850.1.1 | Tomato | cytosol | 15.86 | 13.69 |
| Solyc04g081100.2.1 | Tomato | nucleus | 26.21 | 7.31 |
Protein Annotations
| EnsemblPlants:Solyc05g055580.1.1 | EnsemblPlantsGene:Solyc05g055580.1 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Amino_oxidase | InterPro:FAD/NAD-bd_sf |
| InterPro:IPR036188 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF260 | PFAM:PF01593 | SEG:seg | SUPFAM:SSF51905 |
| UniParc:UPI0002767246 | UniProt:K4C2N4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5:+:65154643..65156509
Molecular Weight (calculated)
64992.4 Da
IEP (calculated)
9.682
GRAVY (calculated)
-0.199
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRRGGRSES KQCLNHVSND FVGNTNEEQS ALVATSSSGK ISYTRGKSSN FAHRNVQSKM VKSRISKKKL VSDEIICINN ESYSKALVAL TAGFPSDSLK
101: DEEIKAGVVS EGGGTEMFVD IIHERYSGLL DSTNNYLLSY AYVNFGVTLA IKDKIPTRPS KGRVIVIGAG LAGLAAARQL MLFGFEVIVL EEQKRAGGRV
201: YTKKMEGGNK IAAADFEGSV LTGTLGNPLG VLARQLSYTL HTTSIWIKKW RLLIMNFWKR QARSDKTYLR LFSLGEALET LRKDSSVSMN DEEMNLFNWH
301: LANLEYANAS LLSKLSLAFW DQDDSYDMGG DHRFLPGGNG RLIDALAENV PISFEKTVHT IRYGRDRVKV ITAGQVFEGD MVLCTVPLGV LKRGSIRFFP
401: ELPQRKLDTI RRLGFGLLNK VALLFPYVFW DSNIDTFGHV ADDSSFRVDG NPMDEHLDIK KWDFWIRQAR ARSFLRNGSI DPYFHYKNFK LGGSEIPYHK
501: PVEGSISYLP KPKGVELKQL AITLVLIFPI DKVLSLPLPT LLAFLGIRKE VETVNKKEHK IYEMLVSSLI YATDTNDVNI
101: DEEIKAGVVS EGGGTEMFVD IIHERYSGLL DSTNNYLLSY AYVNFGVTLA IKDKIPTRPS KGRVIVIGAG LAGLAAARQL MLFGFEVIVL EEQKRAGGRV
201: YTKKMEGGNK IAAADFEGSV LTGTLGNPLG VLARQLSYTL HTTSIWIKKW RLLIMNFWKR QARSDKTYLR LFSLGEALET LRKDSSVSMN DEEMNLFNWH
301: LANLEYANAS LLSKLSLAFW DQDDSYDMGG DHRFLPGGNG RLIDALAENV PISFEKTVHT IRYGRDRVKV ITAGQVFEGD MVLCTVPLGV LKRGSIRFFP
401: ELPQRKLDTI RRLGFGLLNK VALLFPYVFW DSNIDTFGHV ADDSSFRVDG NPMDEHLDIK KWDFWIRQAR ARSFLRNGSI DPYFHYKNFK LGGSEIPYHK
501: PVEGSISYLP KPKGVELKQL AITLVLIFPI DKVLSLPLPT LLAFLGIRKE VETVNKKEHK IYEMLVSSLI YATDTNDVNI
001: MNPPDNYVPS VSHSQFSTPP PPQSSSNTNT ETSLNPFPNS ISTSISNPSF EQMVSFSAPK KRRRGRSQRS MSSLNSLPVP NVGLLPGNSN FVSSSASSSG
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GIHFS
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GIHFS
Arabidopsis Description
FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.