Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G057320.1 | Barley | extracellular, peroxisome | 9.16 | 85.45 |
| PGSC0003DMT400060071 | Potato | peroxisome | 36.55 | 76.22 |
| GSMUA_Achr4P25280_001 | Banana | plastid | 56.43 | 75.49 |
| KRH71619 | Soybean | cytosol | 63.35 | 74.2 |
| Zm00001d002684_P001 | Maize | extracellular | 56.04 | 71.16 |
| EES12649 | Sorghum | plastid | 55.95 | 71.04 |
| Os04t0560300-01 | Rice | cytosol | 56.14 | 71.02 |
| TraesCS2B01G425100.1 | Wheat | plastid | 55.36 | 70.38 |
| Solyc02g033080.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole | 23.39 | 69.16 |
| TraesCS2D01G404400.1 | Wheat | plastid | 54.97 | 67.38 |
| TraesCS2A01G407400.1 | Wheat | cytosol | 54.97 | 67.3 |
| CDY00667 | Canola | cytosol, plastid | 59.94 | 67.29 |
| Bra001357.1-P | Field mustard | nucleus, plastid | 60.04 | 66.96 |
| CDX73929 | Canola | nucleus, plastid | 60.14 | 66.92 |
| Solyc05g055590.1.1 | Tomato | cytosol | 41.23 | 66.61 |
| HORVU2Hr1G096300.1 | Barley | plastid | 29.43 | 66.37 |
| AT3G10390.3 | Thale cress | plastid | 60.33 | 66.13 |
| PGSC0003DMT400019222 | Potato | cytosol, plastid | 62.77 | 64.66 |
| Solyc11g008320.1.1 | Tomato | nucleus | 62.77 | 64.14 |
| PGSC0003DMT400060365 | Potato | plastid | 31.77 | 60.15 |
| VIT_03s0017g01000.t01 | Wine grape | nucleus | 35.58 | 53.91 |
| VIT_19s0014g03430.t01 | Wine grape | cytosol | 38.6 | 52.45 |
| Solyc05g055580.1.1 | Tomato | cytosol, peroxisome, plastid | 27.97 | 49.48 |
| VIT_12s0028g01120.t01 | Wine grape | cytosol | 14.91 | 31.22 |
| VIT_01s0127g00770.t01 | Wine grape | cytosol | 2.63 | 29.67 |
| VIT_04s0043g00220.t01 | Wine grape | plastid | 13.55 | 28.37 |
| VIT_11s0016g02180.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 12.48 | 24.66 |
| VIT_01s0127g00800.t01 | Wine grape | extracellular, plasma membrane, vacuole | 10.92 | 22.63 |
| VIT_17s0053g00880.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 5.56 | 22.35 |
| VIT_01s0127g00750.t01 | Wine grape | golgi, vacuole | 10.33 | 21.68 |
| VIT_01s0127g00780.t01 | Wine grape | golgi, vacuole | 10.33 | 20.99 |
| VIT_13s0064g00390.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 9.55 | 19.48 |
| VIT_18s0001g13650.t01 | Wine grape | nucleus | 10.72 | 9.39 |
| VIT_18s0001g13640.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 3.02 | 5.92 |
Protein Annotations
| Gene3D:1.10.10.10 | EntrezGene:100259817 | wikigene:100259817 | MapMan:12.3.3.8.1 | Gene3D:3.50.50.60 | Gene3D:3.90.660.10 |
| InterPro:Amino_oxidase | ProteinID:CCB56151 | ProteinID:CCB56151.1 | UniProt:F6HND2 | InterPro:FAD/NAD-bd_sf | EMBL:FN595998 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Homeobox-like_sf | InterPro:IPR007526 |
| InterPro:IPR036188 | InterPro:IPR036388 | EntrezGene:LOC100259817 | wikigene:LOC100259817 | PFAM:PF01593 | PFAM:PF04433 |
| PFscan:PS50934 | PANTHER:PTHR10742 | PANTHER:PTHR10742:SF260 | SUPFAM:SSF46689 | SUPFAM:SSF51905 | SUPFAM:SSF54373 |
| InterPro:SWIRM | UniParc:UPI0002109B71 | ArrayExpress:VIT_13s0019g04820 | EnsemblPlantsGene:VIT_13s0019g04820 | EnsemblPlants:VIT_13s0019g04820.t01 | unigene:Vvi.14618 |
| InterPro:WH-like_DNA-bd_sf | RefSeq:XP_002273083 | RefSeq:XP_002273083.1 | RefSeq:XP_010658356.1 | RefSeq:XP_010658357.1 | RefSeq:XP_010658358.1 |
| RefSeq:XP_010658361.1 | RefSeq:XP_010658362.1 | RefSeq:XP_010658363.1 | RefSeq:XP_010658364.1 | RefSeq:XP_010658365.1 | SEG:seg |
Description
No Description!
Coordinates
chr13:+:6502208..6511710
Molecular Weight (calculated)
110370.0 Da
IEP (calculated)
8.992
GRAVY (calculated)
-0.236
Length
1026 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPSNQISEF SSFPPLPLDP LQYTIFVPHS NPNPNNNPHP SSNTNSNPIS NPNPNPNPDP VPNSNHNPYP DHFLSLSIPR KRRRGRPRSA ATFTPSQNQV
0101: FQIPHTSNGT INGNNYLAGA SSSSTSFSKL SIENPTSSTA AVPDISDEII VINKEATSEA LIALSAGFPA DSLTEEEIDA GVLSIIGGIE QVNYILIRNH
0201: ILAKWRENVS SWVAKEMFLG SVPSHCHILL DSAYNFLVTH GYVNFGVAHA IKEKIPTEPS KQNVVVIGAG LAGLAAARQL MRFGYKVTVL EGRKRAGGRV
0301: YTKKMEGGNR TAAADLGGSV LTGTHGNPLG IVARQLGYHL HKVRDKCPLY SVDGKPVDPD MDLKVEADFN RLLDKASKLR QLMGEVSVDV SLGAALETFR
0401: QVCGDAVNAE EINLFNWHLA NLEYANAGLL SKLSLAFWDQ DDPYDMGGDH CFLPGGNGRL VQVLSENVPI LYEKTVHTIR YGSDGVQVIA GNQVFEGDMA
0501: LCTVPLGVLK SGSIKFIPEL PQRKLDGIKR LGFGLLNKVA MLFPHVFWGT DLDTFGHLSD DPSRRGEFFL FYSYATVAGG PLLIALVAGE AAHKFESMPP
0601: TDAVTWVIQI LRGIYEPQGI NVPEPIQTVC TRWGSDPFSL GSYSNVAVGA SGDDYDILAE NVGDGRLFFA GEATTRRYPA TMHGAFLSGL REAANMAHYA
0701: NARVIRIKIE RSPSKNAHSC ASLLADLFRE PDLEFGSFAV IFGKKNSDPK SMVILRVTFT GPRKGSKLDQ NHSNKLLFQQ LESHFNHQQQ LHIYTLLSRQ
0801: QALELREVRG GDDMRLNFLC EKLGVKLVAR KGLGPSADSV IASIKAERGN RKPASTSLAL KSGMKPKAAG SKRKVVRKAK VVSNVGGLMP RNSNMRNGNS
0901: SIPPSNLIVR NGSGSTPPPN LNMGNGSGLV PRPNLNMGNG SGLVPSSNLN MTSGLLPPSN LSIGNGSGFT PAILNMGNNG SSVPPDLNIG NGGGSELHPH
1001: LGLGNGSGVV PPPNINVAES KLMGQM
0101: FQIPHTSNGT INGNNYLAGA SSSSTSFSKL SIENPTSSTA AVPDISDEII VINKEATSEA LIALSAGFPA DSLTEEEIDA GVLSIIGGIE QVNYILIRNH
0201: ILAKWRENVS SWVAKEMFLG SVPSHCHILL DSAYNFLVTH GYVNFGVAHA IKEKIPTEPS KQNVVVIGAG LAGLAAARQL MRFGYKVTVL EGRKRAGGRV
0301: YTKKMEGGNR TAAADLGGSV LTGTHGNPLG IVARQLGYHL HKVRDKCPLY SVDGKPVDPD MDLKVEADFN RLLDKASKLR QLMGEVSVDV SLGAALETFR
0401: QVCGDAVNAE EINLFNWHLA NLEYANAGLL SKLSLAFWDQ DDPYDMGGDH CFLPGGNGRL VQVLSENVPI LYEKTVHTIR YGSDGVQVIA GNQVFEGDMA
0501: LCTVPLGVLK SGSIKFIPEL PQRKLDGIKR LGFGLLNKVA MLFPHVFWGT DLDTFGHLSD DPSRRGEFFL FYSYATVAGG PLLIALVAGE AAHKFESMPP
0601: TDAVTWVIQI LRGIYEPQGI NVPEPIQTVC TRWGSDPFSL GSYSNVAVGA SGDDYDILAE NVGDGRLFFA GEATTRRYPA TMHGAFLSGL REAANMAHYA
0701: NARVIRIKIE RSPSKNAHSC ASLLADLFRE PDLEFGSFAV IFGKKNSDPK SMVILRVTFT GPRKGSKLDQ NHSNKLLFQQ LESHFNHQQQ LHIYTLLSRQ
0801: QALELREVRG GDDMRLNFLC EKLGVKLVAR KGLGPSADSV IASIKAERGN RKPASTSLAL KSGMKPKAAG SKRKVVRKAK VVSNVGGLMP RNSNMRNGNS
0901: SIPPSNLIVR NGSGSTPPPN LNMGNGSGLV PRPNLNMGNG SGLVPSSNLN MTSGLLPPSN LSIGNGSGFT PAILNMGNNG SSVPPDLNIG NGGGSELHPH
1001: LGLGNGSGVV PPPNINVAES KLMGQM
001: MNPPDNYVPS VSHSQFSTPP PPQSSSNTNT ETSLNPFPNS ISTSISNPSF EQMVSFSAPK KRRRGRSQRS MSSLNSLPVP NVGLLPGNSN FVSSSASSSG
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GGSLHVGGET MKKIEQ
101: RFNVEVVNGS NQTVKSYPGI GDEIITINKE ATTEALLALT AGFPADSLTE EEIEFGVVPI VGGIEQVNYI LIRNHIISKW RENISSWVTK EMFLNSIPKH
201: CSSLLDSAYN YLVTHGYINF GIAQAIKDKF PAQSSKSSVI IVGAGLSGLA AARQLMRFGF KVTVLEGRKR PGGRVYTKKM EANRVGAAAD LGGSVLTGTL
301: GNPLGIIARQ LGSSLYKVRD KCPLYRVDGK PVDPDVDIKV EVAFNQLLDK ASKLRQLMGD VSMDVSLGAA LETFRQVSGN DVATEEMGLF NWHLANLEYA
401: NAGLVSKLSL AFWDQDDPYD MGGDHCFLPG GNGRLVQALA ENVPILYEKT VQTIRYGSNG VKVTAGNQVY EGDMVLCTVP LGVLKNGSIK FVPELPQRKL
501: DCIKRLGFGL LNKVAMLFPY VFWSTDLDTF GHLTEDPNYR GEFFLFYSYA PVAGGALLIA LVAGEAAHKF ETMPPTDAVT RVLHILRGIY EPQGINVPDP
601: LQTVCTRWGG DPFSLGSYSN VAVGASGDDY DILAESVGDG RLFFAGEATT RRYPATMHGA FVTGLREAAN MAQSAKARGI RKRIDRNPSR NAHSCAILLA
701: DLFRDPDLEF GSFCIIFSRR NPDPKSPAIL RVTLSEPRKR NEDPKADQHS NKILFQQLQS HFNQQQQIQV YTLLTRQQAL DLREVRGGDE KRLYYLCETL
801: GVKLVGRKGL GVGADSVIAS IKAERTGRKL PSSSTSGTKS GILKAKSGAL KRKMIRRIKG PLPLKQSNNN GVSESIKSES LGNGKSLEQQ QQPRIVESIG
901: GGSSMQGESK SLSTGVASSS GGSLHVGGET MKKIEQ
Arabidopsis Description
FLDProtein FLOWERING locus D-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNW6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.