Factsheet for VIT_17s0053g00880.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:

nucleus 2
plastid 2
peroxisome 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0043g00220.t01	Wine grape	plastid	82.35	42.86
Solyc03g031880.2.1	Tomato	cytosol	68.63	36.61
PGSC0003DMT400061872	Potato	cytosol	68.24	36.4
Solyc02g081390.2.1	Tomato	cytosol	68.24	35.15
KRH20055	Soybean	cytosol	67.84	35.09
KRG98020	Soybean	cytosol	67.84	35.09
PGSC0003DMT400050770	Potato	cytosol	67.84	34.95
GSMUA_Achr9P21250_001	Banana	plastid	61.18	32.03
GSMUA_AchrUn_...	Banana	plastid	62.35	31.93
Os04t0671300-01	Rice	peroxisome	60.39	31.3
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	60.78	31.19
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	60.39	30.99
TraesCS2A01G548100.1	Wheat	peroxisome	58.82	30.8
VIT_12s0028g01120.t01	Wine grape	cytosol	58.82	30.61
HORVU2Hr1G121050.1	Barley	peroxisome	58.82	30.49
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	58.82	30.49
CDY16424	Canola	cytosol, peroxisome, plastid	60.0	30.42
CDY54438	Canola	cytosol, peroxisome, plastid	60.78	30.39
EES13072	Sorghum	plastid	58.04	30.14
TraesCS2B01G579000.1	Wheat	peroxisome	59.22	28.71
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	54.12	28.16
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	53.73	28.13
EES13070	Sorghum	cytosol, peroxisome, plastid	53.73	28.13
Zm00001d026586_P003	Maize	peroxisome, plastid	57.65	27.79
TraesCS2B01G579100.1	Wheat	plastid	51.37	26.73
TraesCS2A01G548200.1	Wheat	plastid	51.37	26.73
HORVU2Hr1G121060.1	Barley	plastid	50.98	26.58
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	51.37	24.26
VIT_01s0127g00750.t01	Wine grape	golgi, vacuole	17.65	9.2
VIT_01s0127g00800.t01	Wine grape	extracellular, plasma membrane, vacuole	17.25	8.89
VIT_11s0016g02180.t01	Wine grape	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	18.04	8.86
VIT_01s0127g00780.t01	Wine grape	golgi, vacuole	17.25	8.71
VIT_13s0064g00390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	16.47	8.35
VIT_03s0017g01000.t01	Wine grape	nucleus	21.96	8.27
VIT_19s0014g03430.t01	Wine grape	cytosol	21.18	7.15
VIT_13s0019g04820.t01	Wine grape	nucleus	22.35	5.56
VIT_01s0127g00770.t01	Wine grape	cytosol	0.78	2.2
VIT_18s0001g13650.t01	Wine grape	nucleus	8.63	1.88
VIT_18s0001g13640.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:35.1	InterPro:Amino_oxidase	ProteinID:CBI35307	ProteinID:CBI35307.3
UniProt:D7TXT2	InterPro:FAD/NAD-bd_sf	EMBL:FN596258	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR036188	PFAM:PF01593	PANTHER:PTHR10742	PANTHER:PTHR10742:SF228	SUPFAM:SSF51905	TMHMM:TMhelix
UniParc:UPI0001BE44D3	ArrayExpress:VIT_17s0053g00880	EnsemblPlantsGene:VIT_17s0053g00880	EnsemblPlants:VIT_17s0053g00880.t01	RefSeq:XP_003634330	RefSeq:XP_003634330.1

Description

No Description!

Coordinates

chr17:+:16520516..16521511

Molecular Weight (calculated)

29112.5 Da

IEP (calculated)

5.505

GRAVY (calculated)

0.101

Length

255 amino acids

Sequence
(BLAST)

001: MGASWLHGAC NENPLAPLIC RLGLTLYRTS GDDSVLYDHD LESCTLFDMD GHQVPQKMVI EVGETFKKIL KETENVRIEH HDDMSVLQAI SIVLDRHPEL
101: RQEGLSNEVL QWYICRMESW FVVDADMISL KSWDQEHILS GGQRLMIQGY DLIIKTLSKD LNIHLNHRVT NISYGCKKVV VTVEGERNFV ADAAIITVPI
201: GILKANLIES NMIPASMREL CELLILITVV YCSIHLCTFS YFNINFYVHF IPKMN

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.