CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	96.92	96.33
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	90.55	90.55
TraesCS2B01G579100.1	Wheat	plastid	85.01	84.49
TraesCS2A01G548200.1	Wheat	plastid	84.6	84.08
HORVU2Hr1G121060.1	Barley	plastid	83.98	83.64
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	84.6	76.3
EES13072	Sorghum	plastid	75.56	74.95
GSMUA_AchrUn_...	Banana	plastid	71.66	70.08
GSMUA_Achr9P21250_001	Banana	plastid	69.82	69.82
Solyc03g031880.2.1	Tomato	cytosol	65.09	66.32
PGSC0003DMT400061872	Potato	cytosol	64.89	66.11
PGSC0003DMT400050770	Potato	cytosol	65.91	64.85
Solyc02g081390.2.1	Tomato	cytosol	65.71	64.65
KRG98020	Soybean	cytosol	64.89	64.1
KRH72905	Soybean	peroxisome	64.68	63.77
KRH20055	Soybean	cytosol	64.48	63.69
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	63.45	62.55
VIT_04s0043g00220.t01	Wine grape	plastid	62.63	62.24
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	60.37	59.15
EES12883	Sorghum	cytosol, mitochondrion, peroxisome, plastid	57.91	58.39
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	59.34	58.15
CDY16424	Canola	cytosol, peroxisome, plastid	58.93	57.06
CDY54438	Canola	cytosol, peroxisome, plastid	59.34	56.67
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	28.13	53.73
KXG39969	Sorghum	vacuole	24.64	23.53
OQU80059	Sorghum	peroxisome	26.9	23.39
EES03507	Sorghum	mitochondrion	24.23	22.91
EES14528	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	31.01	19.84
EES12649	Sorghum	plastid	32.03	19.31
OQU85392	Sorghum	nucleus	30.18	17.29
EER94594	Sorghum	nucleus	33.47	9.06

Protein Annotations

Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	EntrezGene:8082588	InterPro:Amino_oxidase	UniProt:C5YA47
EnsemblPlants:EES13070	ProteinID:EES13070	ProteinID:EES13070.1	InterPro:FAD/NAD-bd_sf	InterPro:Flavin_amine_oxidase	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036188
PFAM:PF01593	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	EnsemblPlantsGene:SORBI_3006G261500	SUPFAM:SSF51905
SUPFAM:SSF54373	unigene:Sbi.1011	UniParc:UPI0001A875A0	RefSeq:XP_002448742.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:59630132..59633512

Molecular Weight (calculated)

53115.4 Da

IEP (calculated)

4.968

GRAVY (calculated)

-0.077

Length

487 amino acids

Sequence
(BLAST)

001: MDPNGLKTGG LLLPTIERRC TSPPSVIVIG GGISGVAAAR ALSNSSFKVT VLESRDRIGG RVHTDYSFGC PIDMGASWLH GVCNENSLAP LIGYLGLRLY
101: RTSDDNSVLY DHDLESYALF DKDGNQVPKE TVDKVGETFE RILEETVKVR DEQEHDMPLL QAISIVFERH PHLKLEGLDD QVLQWCVCRL EAWFAADADE
201: ISLKNWDQER VLTGGHGLMV NGYYPVIEAL AQGLDIRLNQ RVTEITRQYN GVKVTTEDGT SYFADACIIS VPLGVLKANV IKFEPELPSW KSSAIADLGV
301: GVENKIAMHF DRVFWPNVEV LGMVGPTPKA CGYFLNLHKA TGNPVLVYMA AGRFAQEVEK LSDKEAVSLV VSHLKKMLPD ASEPTQYLVS RWGSDPNSLG
401: SYSCDLVGKP ADVCARFSAP VDNLYFAGEA ASAEHSGSVH GAYSSGIAAA EECRKRLLTL KGIPDLVQVA AWEEMAGAVA PLQICRT

Best Arabidopsis Sequence Match ( AT2G43020.1 )
(BLAST)

001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL

Arabidopsis Description

PAO2Probable polyamine oxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKX5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.