Factsheet for PGSC0003DMT400061872

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 3
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g031880.2.1	Tomato	cytosol	98.12	98.12
PGSC0003DMT400050770	Potato	cytosol	85.36	82.42
VIT_04s0043g00220.t01	Wine grape	plastid	75.94	74.08
KRH72905	Soybean	peroxisome	73.43	71.05
KRH17261	Soybean	cytosol, peroxisome, plasma membrane	72.59	70.24
GSMUA_Achr9P21250_001	Banana	plastid	70.71	69.4
GSMUA_AchrUn_...	Banana	plastid	71.13	68.27
VIT_17s0053g00880.t01	Wine grape	endoplasmic reticulum, peroxisome, plasma membrane	36.4	68.24
Os04t0671300-01	Rice	peroxisome	69.87	67.89
TraesCS2A01G548100.1	Wheat	peroxisome	69.04	67.76
HORVU2Hr1G121050.1	Barley	peroxisome	69.04	67.07
TraesCS2D01G549200.1	Wheat	peroxisome, plastid	69.04	67.07
Bra039742.1-P	Field mustard	cytosol, peroxisome, plastid	69.46	66.8
AT1G65840.1	Thale cress	cytosol, peroxisome, plastid	69.25	66.6
EES13072	Sorghum	plastid	68.2	66.4
CDY16424	Canola	cytosol, peroxisome, plastid	68.83	65.41
CDY54438	Canola	cytosol, peroxisome, plastid	69.46	65.1
EES13070	Sorghum	cytosol, peroxisome, plastid	66.11	64.89
Zm00001d001883_P008	Maize	cytosol, peroxisome, plastid	66.32	64.69
Os04t0671200-01	Rice	cytosol, peroxisome, plastid	65.69	64.48
TraesCS2B01G579000.1	Wheat	peroxisome	69.46	63.12
PGSC0003DMT400074125	Potato	plastid	63.18	61.89
TraesCS2B01G579100.1	Wheat	plastid	63.18	61.63
HORVU2Hr1G121060.1	Barley	plastid	62.97	61.55
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	62.97	61.43
TraesCS2A01G548200.1	Wheat	plastid	62.97	61.43
Zm00001d026586_P003	Maize	peroxisome, plastid	66.95	60.49
TraesCS2D01G549300.1	Wheat	mitochondrion, plastid	63.39	56.11
PGSC0003DMT400060071	Potato	peroxisome	30.75	29.88
PGSC0003DMT400055123	Potato	cytosol	24.27	22.31
PGSC0003DMT400017667	Potato	vacuole	23.01	22.22
PGSC0003DMT400045965	Potato	endoplasmic reticulum	23.43	21.54
PGSC0003DMT400094539	Potato	golgi	23.43	20.74
PGSC0003DMT400060365	Potato	plastid	23.01	20.3
PGSC0003DMT400049658	Potato	cytosol	30.54	19.24
PGSC0003DMT400095293	Potato	nucleus	30.33	17.86
PGSC0003DMT400019222	Potato	cytosol, plastid	30.13	14.46
PGSC0003DMT400000891	Potato	endoplasmic reticulum	23.01	13.73
PGSC0003DMT400009649	Potato	cytosol	32.01	11.81

Protein Annotations

EntrezGene:102594410	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.2	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:IPR036188	UniProt:M1C867	PFAM:PF01593	EnsemblPlantsGene:PGSC0003DMG401024074	PGSC:PGSC0003DMG401024074
EnsemblPlants:PGSC0003DMT400061872	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF264	SUPFAM:SSF51905	SUPFAM:SSF54373
TMHMM:TMhelix	UniParc:UPI000295DCA6	RefSeq:XP_006343304.1	SEG:seg	:	:

Description

Amine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG401024074]

Coordinates

chr3:-:2763075..2768867

Molecular Weight (calculated)

52880.5 Da

IEP (calculated)

5.837

GRAVY (calculated)

-0.087

Length

478 amino acids

Sequence
(BLAST)

001: MELKGNDSGR RHGSSPSVIV IGGGISGVAA ARFLQNAYFK VLLLESRDRL GGRIHTDNSF GCPVDLGASW LHGVCNENPL APLIRRLGLT LYRTSGDDSV
101: LYDHDLESCM LFDMDGHQVP HNTVAEVGDV FKKILDETEK VRNENSNDIS VLQAISIVLD RHPELRQEGV SHEVLQWYIC RMEAWFSADA DTISLKTWDQ
201: EQVLTGGHGL MVQGYHPVIE ALSKDIDIRL NHRVKAITDG YNKVMVTVED GRNFVADAAI ITVPIGVLKA NLIEFKPKLP DWKLSAIADL GVGNENKIAL
301: RFDTVFWPNV ELLGIVAPTS YACGYFLNLH KATGHQVLVY MAAGRLAYDV EKLSDREAAD FVMRQLKKMF PDAPEPVQYL VSRWGTDPDS LGCYSYDLVG
401: KPTDIYDKLR APLGNLFFGG EAVCMDDHQG SVHGAYSAGI IAAEDCCQHL IKRLGSVQLV SSREEILKSI VPLKISRM

Best Arabidopsis Sequence Match ( AT1G65840.1 )
(BLAST)

001: MDKKKNSFPD NLPEGTISEL MQKQNNVQPS VIVIGSGISG LAAARNLSEA SFKVTVLESR DRIGGRIHTD YSFGCPVDMG ASWLHGVSDE NPLAPIIRRL
101: GLTLYRTSGD DSILYDHDLE SYGLFDMHGN KIPPQLVTKV GDAFKRILEE TEKIRDETAN DMSVLQGISI VLDRNPELRQ EGMAYEVLQW YLCRMEAWFA
201: VDANLISLKC WDQDECLSGG HGLMVQGYEP VIRTIAKDLD IRLNHRVTKV VRTSNNKVIV AVEGGTNFVA DAVIITVPIG VLKANLIQFE PELPQWKTSA
301: ISGLGVGNEN KIALRFDRAF WPNVEFLGMV APTSYACGYF LNLHKATGHP VLVYMAAGNL AQDLEKLSDE ATANFVMLQL KKMFPDAPDP AQYLVTRWGT
401: DPNTLGCYAY DVVGMPEDLY PRLGEPVDNI FFGGEAVNVE HQGSAHGAFL AGVSASQNCQ RYIFERLGAW EKLKLVSLMG NSDILETATV PLQISRM

Arabidopsis Description

PAO4Probable polyamine oxidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8H191]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.