Factsheet for PGSC0003DMT400017667

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 2
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g087590.2.1	Tomato	vacuole	96.97	96.58
KRH32977	Soybean	plasma membrane	76.97	76.2
VIT_13s0064g00390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	76.36	75.15
KRH13982	Soybean	plasma membrane	75.76	74.85
AT5G13700.1	Thale cress	extracellular	71.31	74.79
CDX70516	Canola	extracellular	70.1	73.67
Bra006210.1-P	Field mustard	extracellular	69.9	73.46
KRH39911	Soybean	plasma membrane	68.28	72.69
CDX78534	Canola	extracellular	69.9	72.08
KRH69303	Soybean	vacuole	44.85	57.66
GSMUA_Achr6P24910_001	Banana	endoplasmic reticulum	27.47	50.0
GSMUA_Achr5P08640_001	Banana	cytosol, nucleus, peroxisome	43.03	47.12
GSMUA_Achr6P24880_001	Banana	cytosol	26.67	46.81
HORVU6Hr1G091060.1	Barley	cytosol	40.61	46.21
HORVU7Hr1G118240.1	Barley	endoplasmic reticulum, golgi, vacuole	44.44	44.44
TraesCS7B01G461800.1	Wheat	plasma membrane, vacuole	44.04	44.04
HORVU7Hr1G118260.1	Barley	plasma membrane, vacuole	44.24	43.98
TraesCS7A01G378800.1	Wheat	cytosol	40.4	43.76
TraesCS7D01G524900.1	Wheat	plasma membrane	43.23	42.97
TraesCS4D01G265800.1	Wheat	unclear	42.63	42.8
HORVU6Hr1G042330.1	Barley	cytosol	32.32	42.78
TraesCS7B01G280700.1	Wheat	cytosol	41.21	42.77
Os09t0368500-01	Rice	golgi	40.81	42.62
TraesCS4B01G265900.1	Wheat	vacuole	42.42	42.6
Zm00001d024281_P001	Maize	extracellular	42.63	42.2
Zm00001d028172_P001	Maize	cytosol	31.52	42.16
Os09t0368200-00	Rice	golgi, vacuole	42.22	42.14
TraesCS7D01G375700.1	Wheat	extracellular	42.63	41.95
TraesCS7A01G539200.1	Wheat	plasma membrane, vacuole	43.03	41.93
HORVU7Hr1G090410.1	Barley	vacuole	42.02	41.35
TraesCS5A01G549600.1	Wheat	plastid	40.61	40.61
TraesCS4A01G039600.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	37.17	39.32
KXG39969	Sorghum	vacuole	40.4	39.22
TraesCS4B01G385300.1	Wheat	endoplasmic reticulum	37.58	38.67
OQU80059	Sorghum	peroxisome	42.63	37.68
HORVU4Hr1G071450.1	Barley	mitochondrion	42.22	36.8
GSMUA_Achr6P24870_001	Banana	vacuole	17.37	33.86
GSMUA_Achr6P24900_001	Banana	vacuole	20.2	32.89
Os03t0193400-00	Rice	nucleus, peroxisome	13.33	32.67
PGSC0003DMT400041150	Potato	cytosol, mitochondrion, peroxisome, plastid	23.84	24.08
PGSC0003DMT400074125	Potato	plastid	23.64	23.98
PGSC0003DMT400061872	Potato	cytosol	22.22	23.01
PGSC0003DMT400050770	Potato	cytosol	22.22	22.22
PGSC0003DMT400060071	Potato	peroxisome	21.62	21.75
PGSC0003DMT400045965	Potato	endoplasmic reticulum	21.82	20.77
PGSC0003DMT400055123	Potato	cytosol	21.41	20.38
PGSC0003DMT400094539	Potato	golgi	21.21	19.44
PGSC0003DMT400095293	Potato	nucleus	24.04	14.66
PGSC0003DMT400060365	Potato	plastid	15.96	14.58
PGSC0003DMT400049658	Potato	cytosol	21.41	13.97
PGSC0003DMT400000891	Potato	endoplasmic reticulum	20.81	12.86
PGSC0003DMT400019222	Potato	cytosol, plastid	22.22	11.04
PGSC0003DMT400009649	Potato	cytosol	21.21	8.1

Protein Annotations

EntrezGene:102581392	Gene3D:3.50.50.60	Gene3D:3.90.660.10	MapMan:8.5.2.1	InterPro:Amino_oxidase	InterPro:FAD/NAD-bd_sf
InterPro:Flavin_amine_oxidase	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006598
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0046592
GO:GO:0050660	GO:GO:0055114	InterPro:IPR036188	UniProt:M1A995	PFAM:PF01593	EnsemblPlantsGene:PGSC0003DMG400006854
PGSC:PGSC0003DMG400006854	EnsemblPlants:PGSC0003DMT400017667	PRINTS:PR00757	PANTHER:PTHR10742	PANTHER:PTHR10742:SF273	SUPFAM:SSF51905
SUPFAM:SSF54373	UniParc:UPI0002969D3A	RefSeq:XP_006345421.1	SEG:seg	:	:

Description

Polyamine oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400006854]

Coordinates

chr1:-:65337135..65344038

Molecular Weight (calculated)

55788.1 Da

IEP (calculated)

5.090

GRAVY (calculated)

-0.299

Length

495 amino acids

Sequence
(BLAST)

001: MEIPRRSSVI IIGAGISGLT AAKVLSENGV DDVVILEAAD KIGGRIRKEE FGGVAAELGA GWIAGVGGKQ SNPVWELALQ ANLRTCFSDY SNARYNIYDH
101: SGKIFPSGIA ADSYKKAVDS AIQKLRSQEG NHNENTEDAA ETPSTPKTPI ELAIDFFLHD FEMAEVEPIS TYVDFGEREF LVADERGYEH LLYKMAENFL
201: FTSEGKIMDS RLKLNTVVRE VQHSRNGVLV TTEDGPLYEA NYVILSVSIG VLQSDLISFS PPLPRWKMEA VRNLDVMIYT KIFLKFPYKF WPCEPEKEFF
301: IYAHERRGYY TFWQHMENAY PGSNMLVVTL TNGESKRVEA QSDQDTLREA MEVLRNMFGP DIPNATDILV PRWWNNRFQR GSYSNYPIYA NHQLVHDIKE
401: PVGRIFFTGE HTSEKFSGYV HGGYLSGIDS SNALLEKMRR DDGWKNESQA FLLEPLLALT GSLTLTQAET VSSLHKCDIP RQLFLSNSKL AEAIL

Best Arabidopsis Sequence Match ( AT5G13700.1 )
(BLAST)

001: MSTASVIIIG AGISGISAAK VLVENGVEDV LILEATDRIG GRIHKQNFGD VPVELGAGWI AGVGGKESNP VWELASRFNL RTCFSDYTNA RFNIYDRSGK
101: IFPTGIASDS YKKAVDSAIL KLKSLEAQCS GQVAEEAPSS PKTPIELAID FILHDFEMAE VEPISTYVDF GEREFLVADE RGYECLLYKM AEEFLVTSHG
201: NILDYRLKLN QVVREVQQSR NGVVVKTEDG SVYEANYVIV SASIGVLQSD LLSFQPLLPR WKTEAIQKCD VMVYTKIFLK FPQCFWPCGP GQEFFIYAHE
301: QRGYFTFWQH MENAYPGSNI LVVTLTNEQS KRVEAQSDQE TMKEAMSVLR DMFGATIPYA TDILVPRWWN NRFQRGSYSN YPMISDNQLL QNIKAPVGRI
401: FFTGEHTSEK FSGYVHGGYL AGIDTSKSLL EEMKQSLLLQ PLLAFTESLT LTHQKPNNSQ IYTNVKFISG TS

Arabidopsis Description

PAO1Polyamine oxidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNA2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.